| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 351553 | 63 (0.710) | 29 (0.530) +TACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAG |
20/268 | 1.3 | 37.9% | intergenic (‑6630/+60323) | unknown/unknown | tRNA‑Ser‑GCT/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA |
| ? | 1 | 1029309 = | 90 (1.020) | intergenic (‑22853/‑5910) | unknown/unknown | tRNA‑Gly‑GCC/SSU rRNA ## 16S rRNA, small subunit ribosomal RNA | |||||
GTGTCTAAACTTTATAAGATTCCTCATTCTCAAGTCATTTATTGGTTAAAAGCCTTTCGTGAAAGAGGGCTTGATGGCATAAAATCGCCTTATACTAAACCTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/351448‑351553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAGGTTTCGTCGCACTAA > 1/1029309‑1029432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| gtggCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCC < 1:295425/245‑1 ggCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGC < 1:313133/240‑1 CTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCAT < 1:85033/250‑1 CTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCAT < 1:327219/250‑1 AACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCA > 1:48938/1‑251 tcatcAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTA > 1:124268/6‑251 tcatcAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTT > 1:241022/6‑195 TCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAAT > 1:381160/1‑250 CCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAGATAGAGCTTGCCTTCATCGCATTTAAATTCAATCA > 1:377559/1‑251 CCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAG < 1:263412/198‑1 CTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAG < 1:508647/213‑1 TCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTG < 1:501201/251‑1 GTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAG < 1:714722/208‑1 CATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCAT > 1:131326/1‑251 CATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCAT > 1:26145/1‑251 AAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAaacg > 1:885805/1‑246 CCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAaacgcaag > 1:386/1‑243 CCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAAT < 1:775644/213‑1 TCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAaacgcaagcatt > 1:772196/1‑239 AAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAaacgcaagcattcttc < 1:883636/250‑17 AAAATCACCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCC < 1:552716/130‑1 aCCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAAT > 1:842282/2‑179 aCCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATC < 1:397753/135‑1 aCCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTG < 1:353926/51‑1 CCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATC < 1:7352/184‑1 CCTTATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGC > 1:491504/1‑157 ATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCG > 1:656266/1‑165 ATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAG > 1:831154/1‑150 ATACTAAACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATT < 1:612519/138‑1 ACCTAAAATACCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAAT < 1:766642/167‑1 CCCAAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATT < 1:619145/121‑1 AGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTC < 1:253596/140‑1 ACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACAT < 1:758810/124‑1 CCTTGAAAAAACTCAAACGAGAAGTCATAGGCGATAATTT > 1:53912/1‑40 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| GTGTCTAAACTTTATAAGATTCCTCATTCTCAAGTCATTTATTGGTTAAAAGCCTTTCGTGAAAGAGGGCTTGATGGCATAAAATCGCCTTATACTAAACCTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/351448‑351553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGTCATAGGCGATAATTTCGCCATTGAAGAGATCTTTAATTGGTGATAAATAGAGCTTGCCTTCATCGCATTTAAATTCAATCACATCGGTGACCCATTTTTCATTAGGTTTCGTCGCACTAA > 1/1029309‑1029432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |