Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	1	907,402	Δ4 bp	intergenic (+394/+108)	unknown → / ← unknown	hypothetical protein/hypothetical protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	= 907401	0 (0.000)	23 (0.270)	21/430	2.7	100%	intergenic (+393/+112)	unknown/unknown	hypothetical protein/hypothetical protein
	?	1	907406 =	0 (0.000)					intergenic (+398/+107)	unknown/unknown	hypothetical protein/hypothetical protein

AGAAGCTTAATTTGATATATAAGATTGTTCGCTTATAAAAAATTTTTAGGTGTTAGAACCTTAGATATCTGATGGCACTGGAGTAAAAACCTGATATAGATCGTGTGTTGAACGATGTTGTACATTTGATGCTAAAGTGCCCTACTTGGGTATGCTAATTACGTAAGAGCGGTAATTATATAAAACGAATTTAAATAAACAGAAAATTATATGAAATGGGGAAGTATTCCCCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCGTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTAACACTTTTGGGGAATTTACCTTGTCTCATCATACGCCAAATTGTTGTGTCGCTCAAGCTGGTGACTT  >  1/907175‑907649                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    cgatagaagcttaatttgatatataagattgttcgcttataaaaaatttttaggtgttagaaccttagatatctgatggcactggagtaaaaacctgatatagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCgg                                                                                                                                                                                                                                  >  1:579898‑M2/232‑251 (MQ=255)                     atataagattgttcgcttataaaaaatttttaggtgttagaaccttagatatctgatggcactggcgtaaaaacctgatatagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTa                                                                                                                                                                                                              >  1:606548‑M2/212‑251 (MQ=255)                     atataagattgttcgcttataaaaaatttttaggtgttagaaccttagatatctgatggcactggagtaaaaacctgatatagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGattat                                                                                                                                                                                                                                         <  1:418394‑M2/13‑1 (MQ=255)                                                  ttaggtgttagaaccttagatatctgatggcactggagtaaaaacctgatatagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTc                                                                                                                                                                                 <  1:282296‑M2/69‑1 (MQ=255)                                                                        tctgatggcactggagtaaaaacctgatatagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCAc                                                                                                                                                                                                                                                 <  1:815303‑M2/5‑1 (MQ=255)                                                                                                     tagatcgtgtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGattat                                                                                                                                                                                                                                         >  1:377494‑M2/132‑144 (MQ=255)                                                                                                             gtgttgaacgatgttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCa                                                                                                                      >  1:139352‑M2/124‑251 (MQ=255)                                                                                                                         gttgtacatttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGAttattt                                                                                                                                                                                                                                       <  1:658348‑M2/15‑1 (MQ=255)                                                                                                                               catttgatgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAatat                                                                                                           <  1:663575‑M2/139‑1 (MQ=255)                                                                                                                                     atgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCa                                                                                                                                                                                                           >  1:223108‑M2/100‑142 (MQ=255)                                                                                                                                     atgctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCa                                                                                              >  1:51365‑M2/100‑251 (MQ=255)                                                                                                                                        ctaaagtgccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACg                                                                                            >  1:209946‑M2/97‑250 (MQ=255)                                                                                                                                                ccctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGcc                                                                                   <  1:189809‑M2/163‑1 (MQ=255)                                                                                                                                                  ctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTc                                                                                                                                                                                 <  1:737034‑M2/69‑1 (MQ=255)                                                                                                                                                  ctacttgggtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGccc                                                                                  >  1:469383‑M2/87‑250 (MQ=255)                                                                                                                                                          gtatgctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagcatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATAc                                                                                                                                                                            >  1:490196‑M2/79‑152 (MQ=255)                                                                                                                                                              gctaattacgtaagagcggtaattatataaaacgaatttaaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTa                                                                     >  1:267202‑M2/75‑251 (MQ=255)                                                                                                                                                                                                    taaataaacagaaaattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAAt                                                                                                                                               >  1:521727‑M2/37‑139 (MQ=255)                                                                                                                                                                                                                 aattatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTAACACTTTTGGGGAATTTACCTTGTCTCATCATACGCCAAATTGTTGTGTCg                  >  1:353600‑M2/24‑251 (MQ=255)                                                                                                                                                                                                                  attatatgaaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTtctc                                                                                                <  1:151176‑M2/150‑1 (MQ=255)                                                                                                                                                                                                                          aaatggggaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTAt                                                                                                                 >  1:94481‑M2/15‑147 (MQ=255)                                                                                                                                                                                                                                 gaagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTAACACTTTTGGGGAATTTACCTTGTCTCATCATACGCCAAATTGTTGTGTCGCTCAAGCTGGTGACtt  >  1:534059‑M2/8‑251 (MQ=255)                                                                                                                                                                                                                                  aagtatCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCTTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTAACACTTTTGGGGAATTTACCTTGTCTcatcat                                     >  1:573166‑M2/7‑215 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                    AGAAGCTTAATTTGATATATAAGATTGTTCGCTTATAAAAAATTTTTAGGTGTTAGAACCTTAGATATCTGATGGCACTGGAGTAAAAACCTGATATAGATCGTGTGTTGAACGATGTTGTACATTTGATGCTAAAGTGCCCTACTTGGGTATGCTAATTACGTAAGAGCGGTAATTATATAAAACGAATTTAAATAAACAGAAAATTATATGAAATGGGGAAGTATTCCCCCCACTCGATTATTTATCGGCGACATAATGCAATGATTTATCAATGAATAAAATTGATATTGTTTATTCTATACCGTCATTTTTACCGTCGTTGGAAGAAAATGCCATCAAGAACGTTCAGCAAGCCAAGTATCAATATCAGATTTTCTCCACGCTACACGCCCCATGGACGCTTTAACACTTTTGGGGAATTTACCTTGTCTCATCATACGCCAAATTGTTGTGTCGCTCAAGCTGGTGACTT  >  1/907175‑907649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.