New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	= 1307879	0 (0.000)	28 (0.430) +AAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAAT	18/312	2.0	53.6%	coding (242/255 nt)	unknown	Uncharacterized protein HI1720
	?	3	= 20579	67 (0.690)					coding (195/348 nt)	unknown	hypothetical protein

CTAAAGAAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAGTCCTTTTAATTTTACTTGAATACATTCATGGTTGACGGTTAATTTAAATTCGGTGGAATAGATTTGTTTGCGACCTAATACGGCTAAACCATTGATTCCGCTATGGTTAAATTGGGCAATCCAACGGCGTAATGTGCTGTCTTTGAGATGAAATTGTTTGAG  >  1/1307629‑1308042                                                                                                                                                                                                                                                           |                                                                                                                                                                    cTAAAGAAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTa                                                                                                                                                                     >  1:608415/1‑251 (MQ=255)       aagCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcc                                                                                                                                                               <  1:333289‑M1/251‑7 (MQ=255)          cACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagccttt                                                                                                                                                            >  1:582766‑M1/1‑242 (MQ=255)              gAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtg                                                                                                                                                        >  1:124748‑M1/1‑238 (MQ=255)              gAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaag                                                                                                                                                                 <  1:38929‑M1/242‑5 (MQ=255)                  tACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaag                                                                                                                                                    <  1:656911‑M1/251‑18 (MQ=255)                   aCCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaaga                                                                                                                                                   <  1:786216‑M1/251‑19 (MQ=255)                    ccGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagag                                                                                                                                                  <  1:551779‑M1/251‑20 (MQ=255)                          gAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtg                                                                                                                                                        >  1:858727‑M1/1‑226 (MQ=255)                           aGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAacagcctttcgtgaaagaggacttga                                                                                                                                           >  1:895065‑M1/1‑225 (MQ=255)                           aGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttga                                                                                                                                           >  1:325758‑M1/1‑225 (MQ=255)                           aGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagag                                                                                                                                                  >  1:871096‑M1/1‑225 (MQ=255)                           aGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGCATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttga                                                                                                                                           >  1:865540‑M1/1‑225 (MQ=255)                             cTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgat                                                                                                                                          <  1:638932‑M1/250‑28 (MQ=255)                                      cGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaat                                                                                                                                <  1:487399‑M1/251‑38 (MQ=255)                                        ccTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatc                                                                                                                               <  1:632995‑M1/250‑39 (MQ=255)                                        ccTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatgg                                                                                                                                        >  1:211361‑M1/1‑212 (MQ=255)                                                gTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttata                                                                                                                       >  1:225415‑M1/1‑204 (MQ=255)                                                gTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATGTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaat                                                                                                                                <  1:436473‑M1/241‑38 (MQ=255)                                                 tGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatac                                                                                                                      <  1:552947‑M1/250‑48 (MQ=255)                                                              aaaaaCTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatac                                                                                                        <  1:883485‑M1/251‑62 (MQ=255)                                                                                     cACTTTAATCTGGCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagatt                                                                                 >  1:73891‑M1/1‑167 (MQ=255)                                                                                     cACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagatt                                                                                 >  1:417452‑M1/1‑167 (MQ=255)                                                                                     cACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagatt                                                                                 <  1:470554‑M1/251‑85 (MQ=255)                                                                                      aCTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcacct                                                                                                                           >  1:218165‑M1/1‑166 (MQ=255)                                                                                       cTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaataccctaaaatgccccgcctaaaactga                                                                               >  1:477936‑M1/1‑165 (MQ=255)                                                                                       cTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattga                                                                               >  1:845646‑M1/1‑165 (MQ=255)                                                                                       cTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggac                                                                                                                                               <  1:731630‑M1/187‑23 (MQ=255)                                                                                                  ccccAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagc                                                                                                                                                                <  1:582545‑M1/159‑6 (MQ=255)                                                                                                   cccAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaac                                                                   <  1:94800‑M1/251‑99 (MQ=255)                                                                                                      aaaCCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaac                                                                <  1:364810‑M1/251‑102 (MQ=255)                                                                                                               cATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaat                                                                                                                                <  1:664828‑M1/178‑38 (MQ=255)                                                                                                                 tCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcac                                                     <  1:756571‑M1/251‑113 (MQ=255)                                                                                                                 tCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaaaacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcac                                                     <  1:631771‑M1/251‑113 (MQ=255)                                                                                                                    aaTTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgactttcaacaaa                                                  >  1:624680‑M1/1‑136 (MQ=255)                                                                                                                        tGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagc                                              <  1:413793‑M1/251‑120 (MQ=255)                                                                                                                            gTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaac                                                                   <  1:885434‑M1/226‑99 (MQ=255)                                                                                                                            gTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaag                                                                             <  1:48204‑M1/216‑89 (MQ=255)                                                                                                                            gTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgat                                                                                                                                          <  1:53362‑M1/155‑28 (MQ=255)                                                                                                                                 gATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaa                                     >  1:197949‑M1/1‑123 (MQ=255)                                                                                                                                 gATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaa                                     >  1:321089‑M1/1‑123 (MQ=255)                                                                                                                                     aTGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcacctt                                                                                                                          >  1:265228‑M1/1‑119 (MQ=255)                                                                                                                                     aTGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaag                                                                                                                                                                 >  1:573715‑M1/1‑119 (MQ=255)                                                                                                                                       gCCCTACTCTTATCACTTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaa                               >  1:131653‑M1/1‑117 (MQ=255)                                                                                                                                       gCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttg                                                                                                                                            <  1:840899‑M1/142‑26 (MQ=255)                                                                                                                                            aCTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgag                          >  1:485953‑M1/1‑112 (MQ=255)                                                                                                                                            aCTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatac                                                                                                                      <  1:353230‑M1/159‑48 (MQ=255)                                                                                                                                             ctctTATCGATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccac                                                  <  1:65156‑M1/226‑116 (MQ=255)                                                                                                                                             ctctTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgaga                         >  1:156612‑M1/1‑111 (MQ=255)                                                                                                                                             ctctTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgaga                         >  1:852003‑M1/1‑111 (MQ=255)                                                                                                                                                 tATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaac                                                                   >  1:479283‑M1/1‑107 (MQ=255)                                                                                                                                                             cTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgagaagtcataggcgataat         <  1:653371‑M1/251‑157 (MQ=255)                                                                                                                                                                   gTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatac                                                                                                                      >  1:541378‑M1/1‑89 (MQ=255)                                                                                                                                                                    ttATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgagaagtcataggcgataatttcgcca  >  1:634686‑M1/1‑88 (MQ=255)                                                                                                                                                                    ttATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactcaaacgagaagtcataggcgataatttcgcc   <  1:600850‑M1/250‑163 (MQ=255)                                                                                                                                                                       tCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagc                                                                                                                                                                >  1:353977‑M1/1‑85 (MQ=255)                                                                                                                                                                             aGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacc                                                                                                                <  1:713786‑M1/132‑54 (MQ=255)                                                                                                                                                                                     gAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatac                                                                                                        >  1:274298‑M1/1‑71 (MQ=255)                                                                                                                                                                                               tGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatac                                                                                                                      >  1:705200‑M1/1‑61 (MQ=255)                                                                                                                                                                                                 gTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaacaaccgacttttcaccacaagccttgaaaaaactc                                 <  1:403411‑M1/191‑133 (MQ=255)                                                                                                                                                                                                    tCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaacctaaaatacccaaaatgaaaaaaatgcagattgaagtgactgaaac                                                                   >  1:123144‑M1/1‑56 (MQ=255)                                                                                                                                                                                                                             gATTCCTCATTCTCAAGTCATTTATTGATTAaaagcctttcgtgaaagaggacttgatggcgtaaaatcaccttatactaaac                                                                                                                 <  1:720576‑M1/83‑53 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                    CTAAAGAAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAGTCCTTTTAATTTTACTTGAATACATTCATGGTTGACGGTTAATTTAAATTCGGTGGAATAGATTTGTTTGCGACCTAATACGGCTAAACCATTGATTCCGCTATGGTTAAATTGGGCAATCCAACGGCGTAATGTGCTGTCTTTGAGATGAAATTGTTTGAG  >  1/1307629‑1308042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.