New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 1 = 13078790 (0.000)28 (0.430)
+AAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAAT
18/312 2.0 53.6% coding (242/255 nt) unknown Uncharacterized protein HI1720
?3 = 20579 67 (0.690)coding (195/348 nt) unknown hypothetical protein

AAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1307635‑1307879
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCC‑AAAATGAAAAAAACGCAGATTGAAGTGGCTGAAACAACCGACTTTTCACCACAAGCCTTTAAAAAACTGAAACGAGAACCCGCCCTTGAAAAAGCGGAGA  <  3/20579‑20476
                                                                                                                                                                                                                                                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                         
AAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCC                                                                                                                                                                <  1:333289/251‑1
   CACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTT                                                                                                                                                             >  1:582766/1‑251
       GAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTG                                                                                                                                                         >  1:124748/1‑251
       GAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAG                                                                                                                                                                  <  1:38929/242‑1
           TACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAG                                                                                                                                                     <  1:656911/251‑1
            ACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGA                                                                                                                                                    <  1:786216/251‑1
             CCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAG                                                                                                                                                   <  1:551779/251‑1
                   GAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTG                                                                                                                                                         >  1:858727/1‑239
                    AGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAACAGCCTTTCGTGAAAGAGGACTTGA                                                                                                                                            >  1:895065/1‑251
                    AGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGA                                                                                                                                            >  1:325758/1‑251
                    AGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAG                                                                                                                                                   >  1:871096/1‑244
                    AGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGCATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGA                                                                                                                                            >  1:865540/1‑251
                      CTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGAT                                                                                                                                           <  1:638932/250‑1
                               CGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAAT                                                                                                                                 <  1:487399/251‑1
                                 CCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATC                                                                                                                                <  1:632995/250‑1
                                 CCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGG                                                                                                                                         >  1:211361/1‑241
                                         GTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATA                                                                                                                        >  1:225415/1‑250
                                         GTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATGTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAAT                                                                                                                                 <  1:436473/241‑1
                                          TGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATAC                                                                                                                       <  1:552947/250‑1
                                                       AAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATAC                                                                                                         <  1:883485/251‑1
                                                                              CACTTTAATCTGGCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATT                                                                                 >  1:73891/1‑251
                                                                              CACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATT                                                                                 >  1:417452/1‑251
                                                                              CACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATT                                                                                 <  1:470554/251‑1
                                                                               ACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCT                                                                                                                            >  1:218165/1‑208
                                                                                CTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCCTAAAATGccccgcctaaaactga                                                                                >  1:477936/1‑235
                                                                                CTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGA                                                                               >  1:845646/1‑251
                                                                                CTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGAC                                                                                                                                                <  1:731630/187‑1
                                                                                           CCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGC                                                                                                                                                                 <  1:582545/159‑1
                                                                                            CCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAAC                                                                   <  1:94800/251‑1
                                                                                               AAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAAC                                                                <  1:364810/251‑1
                                                                                                        CATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAAT                                                                                                                                 <  1:664828/178‑1
                                                                                                          TCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCAC                                                     <  1:756571/251‑1
                                                                                                          TCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAAAACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCAC                                                     <  1:631771/251‑1
                                                                                                             AATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTcaacaaa                                                  >  1:624680/1‑244
                                                                                                                 TGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGC                                              <  1:413793/251‑1
                                                                                                                     GTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAAC                                                                   <  1:885434/226‑1
                                                                                                                     GTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAG                                                                             <  1:48204/216‑1
                                                                                                                     GTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGAT                                                                                                                                           <  1:53362/155‑1
                                                                                                                          GATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAA                                     >  1:321089/1‑251
                                                                                                                          GATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAA                                     >  1:197949/1‑251
                                                                                                                              ATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTT                                                                                                                           >  1:265228/1‑162
                                                                                                                              ATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAG                                                                                                                                                                  >  1:573715/1‑123
                                                                                                                                GCCCTACTCTTATCACTTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTcaa                               >  1:131653/1‑248
                                                                                                                                GCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTG                                                                                                                                             <  1:840899/142‑1
                                                                                                                                     ACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAG                          >  1:485953/1‑251
                                                                                                                                     ACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATAC                                                                                                                       <  1:353230/159‑1
                                                                                                                                      CTCTTATCGATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCAC                                                  <  1:65156/226‑1
                                                                                                                                      CTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGA                         >  1:156612/1‑251
                                                                                                                                      CTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGA                         >  1:852003/1‑251
                                                                                                                                          TATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAAC                                                                   >  1:479283/1‑205
                                                                                                                                                      CTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAgtcataggcgataat         <  1:653371/251‑16
                                                                                                                                                            GTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATAC                                                                                                                       >  1:541378/1‑136
                                                                                                                                                             TTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAgtcataggcgataatttcgcca  >  1:634686/1‑229
                                                                                                                                                             TTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTCAAACGAGAAgtcataggcgataatttcgcc   <  1:600850/250‑22
                                                                                                                                                                TCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGC                                                                                                                                                                 >  1:353977/1‑90
                                                                                                                                                                      AGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACC                                                                                                                 <  1:713786/132‑1
                                                                                                                                                                              GAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATAC                                                                                                         >  1:274298/1‑132
                                                                                                                                                                                        TGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATAC                                                                                                                       >  1:705200/1‑108
                                                                                                                                                                                          GTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAACAACCGACTTTTCACCACAAGCCTTGAAAAAACTc                                 <  1:403411/191‑2
                                                                                                                                                                                             TCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAACCTAAAATACCC‑AAAATGAAAAAAATGCAGATTGAAGTGACTGAAAC                                                                   >  1:123144/1‑154
                                                                                                                                                                                                                      GATTCCTCATTCTCAAGTCATTTATTGATTAAAAGCCTTTCGTGAAAGAGGACTTGATGGCGTAAAATCACCTTATACTAAAC                                                                                                                  <  1:720576/83‑1
                                                                                                                                                                                                                                                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                                                                                                         
AAGCACCGAATTACCGCATGAGCTAATTCAACGCCTAAAAAGTGCGGTTGGTTTAAAAAACTTTTTTCAAACTGACCGCACTTTAATCTGCCCCCAAACCCGGGCATCTAATTTGAAGTGCAGATTATGCCCTACTCTTATCAATTTCATCTAAAAGTTATCAAACAGGTCACCGAACAGGATTTGGTATCCGTGAGGTGGCTAAACTTCATCAGATTCCTCATTCTCAAGTCATTTATTGATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  1/1307635‑1307879
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCC‑AAAATGAAAAAAACGCAGATTGAAGTGGCTGAAACAACCGACTTTTCACCACAAGCCTTTAAAAAACTGAAACGAGAACCCGCCCTTGAAAAAGCGGAGA  <  3/20579‑20476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.