New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	1	623657 =	65 (0.770)	14 (0.170) +G	10/428	5.0	30.2%	intergenic (+144/+532)	unknown/unknown	Outer membrane protein A precursor/PTS system, N‑acetylglucosamine‑specific IIC component / PTS system, N‑acetylglucosamine‑specific IIB component (EC 2.7.1.193)
	?	1	1202140 =	0 (0.000)					intergenic (+131/+464)	unknown/unknown	Na+/H+ antiporter/LSU rRNA ## 23S rRNA, large subunit ribosomal RNA
Rejected: Coverage evenness skew score above cutoff.

ACCCGGTTACCGGCAATAAATGTGACACGGTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGATATTTTCTGC  >  1/623407‑623902                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      aCCCGGTTACCGGCAATAAATGTGACACGGTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCATGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATaaaa                                                                                                                                                                                                                                                       <  1:151879/251‑1 (MQ=255)          ccGGCAATAAATGTGACACGGTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGc                                                                                                                                                                                                                                              <  1:67940/251‑1 (MQ=255)          ccGGCAATAAATGTGACACGGTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGc                                                                                                                                                                                                                                              <  1:407167/251‑1 (MQ=255)                              gTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATAAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAaga                                                                                                                                                                                                                          >  1:445589/1‑251 (MQ=255)                                                  gATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAGTAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATaaa                                                                                                                                                                                                      >  1:260238/1‑251 (MQ=255)                                                    ttGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAg                                                                                                                                                                                                                   <  1:891402/236‑1 (MQ=255)                                                                cTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACtat                                                                                                                                                                                         <  1:770866/250‑1 (MQ=255)                                                                                           tAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTGTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAAt                                                                                                                                                              <  1:422916/250‑1 (MQ=255)                                                                                                      aaaTAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATagg                                                                                                                                                  <  1:419869/251‑1 (MQ=255)                                                                                                        ataatTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATaggag                                                                                                                                                <  1:650646/251‑1 (MQ=255)                                                                                                                            gaaTAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGa                                                                                                                                                                                  >  1:98662/1‑197 (MQ=255)                                                                                                                            gaaTAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCaa                                                                                                                                                                 >  1:170375/1‑214 (MQ=255)                                                                                                                              ataaataaGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGc                                                                                                                                                                           <  1:510732/202‑1 (MQ=255)                                                                                                                                    aaGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATg                                                                                                                                                                                   >  1:622889/1‑188 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAAc                                                                                                                                                                                                                                                     >  1:52976/1‑120 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGc                                                                                                                                                                                                                                              <  1:342385/127‑1 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATaa                                                                                                                                                                                     >  1:684135/1‑184 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATg                                                                                                                                                                                   <  1:637839/186‑1 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGa                                                                                                                   >  1:58106/1‑250 (MQ=255)                                                                                                                                      gTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGa                                                                                                                   >  1:574269/1‑250 (MQ=255)                                                                                                                                       taataaATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACg                                                                                                                 >  1:660372/1‑251 (MQ=255)                                                                                                                                          taaATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGgtaagtaa                                                                                                                            >  1:198211/1‑237 (MQ=255)                                                                                                                                            aaTCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGCCAACATAAAAAATCCTCACTATATAAt                                                                                                                                                                                    >  1:829794/1‑179 (MQ=255)                                                                                                                                             aTCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATaaaaa                                                                                                                                                                                                    <  1:428336/162‑1 (MQ=255)                                                                                                                                              tCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAAt                                                                                                                                                                                    <  1:317093/177‑1 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAAc                                                                                                                                                                                                                                                     <  1:570062/105‑1 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTa                                                                                                                                                                                                                                      >  1:702197/1‑120 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACtatat                                                                                                                                                                                       <  1:538725/167‑1 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACtatat                                                                                                                                                                                       >  1:171234/1‑167 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTc                                                                                                                                        <  1:353334/214‑1 (MQ=255)                                                                                                                                                     gCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGgtaagt                                                                                                                              <  1:561759/224‑1 (MQ=255)                                                                                                                                                          gAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAAt                                                                                                                                                                                    >  1:609321/1‑165 (MQ=255)                                                                                                                                                          gAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGgtaagt                                                                                                                              <  1:204055/219‑1 (MQ=255)                                                                                                                                                             gTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGat                                                                                                                                                       >  1:803450/1‑191 (MQ=255)                                                                                                                                                                     aTTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAAc                                                                                    <  1:397027/250‑1 (MQ=255)                                                                                                                                                                         ttttATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTaa                                                                               <  1:456672/251‑1 (MQ=255)                                                                                                                                                                              tctcTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTAcc                                                                          <  1:405244/251‑1 (MQ=255)                                                                                                                                                                                 ctTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAAt                                                                                                                                                                                    >  1:524308/1‑142 (MQ=255)                                                                                                                                                                                 ctTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATg                                                                                                                                                                                   <  1:726400/143‑1 (MQ=255)                                                                                                                                                                                   tttttCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACAtt                                                                     <  1:171108/251‑1 (MQ=255)                                                                                                                                                                                       tCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATg                                                                                                                                                                                   <  1:461711/137‑1 (MQ=255)                                                                                                                                                                                       tCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGttt                                                                 <  1:799518/251‑1 (MQ=255)                                                                                                                                                                                          gAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTAc                                                                           >  1:406453/1‑238 (MQ=255)                                                                                                                                                                                            aaaTAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGc                                                                                                                                                                           <  1:550117/140‑1 (MQ=255)                                                                                                                                                                                            aaaTAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATaggag                                                                                                                                                <  1:585708/167‑1 (MQ=255)                                                                                                                                                                                            aaaTAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCAcc                                                            <  1:659623/251‑1 (MQ=255)                                                                                                                                                                                            aaaTAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCAc                                                             >  1:161368/1‑250 (MQ=255)                                                                                                                                                                                                 ggCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGaa                                                                                                                                                                                                                                 >  1:98326/1‑81 (MQ=255)                                                                                                                                                                                                      tGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAAt                                                     <  1:634031/248‑1 (MQ=255)                                                                                                                                                                                                                   aTTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAAt                                                                                                                                                                                    <  1:665385/108‑1 (MQ=255)                                                                                                                                                                                                                    ttttttGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATcac                                                                                                  <  1:796190/189‑1 (MQ=255)                                                                                                                                                                                                                                 cTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGa                                                                                                                                                                                  >  1:705160/1‑96 (MQ=255)                                                                                                                                                                                                                                 cTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGa                                                                                      <  1:675967/188‑1 (MQ=255)                                                                                                                                                                                                                                 cTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGa                                                                                      >  1:29404/1‑188 (MQ=255)                                                                                                                                                                                                                                 cTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAAc                                                                                    >  1:261186/1‑190 (MQ=255)                                                                                                                                                                                                                                 cTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTa                       >  1:102531/1‑251 (MQ=255)                                                                                                                                                                                                                                   ttATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGa                                                                                                                                                                                  >  1:335876/1‑94 (MQ=255)                                                                                                                                                                                                                                     ataGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAAc                   <  1:830348/251‑1 (MQ=255)                                                                                                                                                                                                                                        gCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGga                >  1:639603/1‑251 (MQ=255)                                                                                                                                                                                                                                        gCAATAGCGGGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATg                                                                                        <  1:427253/179‑1 (MQ=255)                                                                                                                                                                                                                                                 tGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGatat         <  1:508918/249‑1 (MQ=255)                                                                                                                                                                                                                                                   cTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACGCCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGATATTTTc     <  1:680854/251‑1 (MQ=255)                                                                                                                                                                                                                                                   cTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGATATTTTc     <  1:902002/251‑1 (MQ=255)                                                                                                                                                                                                                                                     tataAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCa                                      >  1:688753/1‑216 (MQ=255)                                                                                                                                                                                                                                                      ataAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGATATTTTctgc  <  1:457490/251‑1 (MQ=255)                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                      ACCCGGTTACCGGCAATAAATGTGACACGGTTAAAGGTCGCAAAGCGCTGATTGCGTGCTTGGCTGATGACCGTCGTGTAGAAATTGCGGTAAACGGCACGAAATAATTTCTTTTTAATTGAAGAATAAATAAGTAATAAATCTGCATGCTGTGAAGTATGCAGATTTTTTTATCTCTTTTTTCAGAAAATAGGCCATGAAAAACACCTGATTTTTTGACCGCACTTTATAGCAATAGCGTGCTTATAAAAACCGTACGCTATGCGTATGGAATCAAAGAGCTTAAGCGGTCAACATAAAAAATCCTCACTATATAATGAATAAGGCTGACAACCAAAATTCAAGATATAGGAGGATAAGTCAATGGTAAGTAAAGCCAATGACGATTCAAGTCTATCACACACCAAATGGAACTGTAAGTACCACATTGTTTTCACCCCGAAATAGAGAAGAAAAGCCATTTGCGGAAAGCTTAGAACGGATAGATATTTTCTGC  >  1/623407‑623902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.