| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | 1 | 1,234,394 | Δ603 bp | intergenic (+95264/+158315) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | 1 | 1234394 | 1234996 | 603 | 35 [0] | [0] 35 | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1234393 | 0 (0.000) | 35 (0.400) | 31/426 | 1.5 | 100% | intergenic (+95263/+158918) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | 1234997 = | 0 (0.000) | intergenic (+95867/+158314) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC | |||||
GTAAGATCCTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1234157‑1234393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taTCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATATTTTTGAATTTATTGAATACTATAAGGGGGTGGGAGCTAGGTCCTGTTAGGGTTTTAC > 1/1234997‑1235202 GTAAGATCCTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAA > 1:586244/1‑251 ATCCTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGA < 1:422553/249‑1 TCCTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACA > 1:391906/1‑251 CTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATG > 1:2803/1‑245 TGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGG < 1:691345/251‑1 CGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTC > 1:449602/1‑216 ACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTAC < 1:133228/250‑1 GCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCAT < 1:708668/195‑1 AAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTAC < 1:6777/250‑1 AAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAAT < 1:23507/189‑1 AAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTT > 1:630386/1‑251 AAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCT > 1:628832/1‑247 GCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAA > 1:119419/1‑251 CTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTC > 1:89356/1‑195 CCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGA > 1:391486/1‑251 TTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTAC > 1:558624/1‑157 TTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCT > 1:692079/1‑220 TATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCG < 1:168905/251‑1 GTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGT > 1:311103/1‑202 TCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTAC < 1:480069/139‑1 TTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTG < 1:229950/191‑1 CTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATATTTTTGAATTTATTGAATACTATAAGGGG < 1:336747/251‑1 GTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGT > 1:612033/1‑167 GTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAG < 1:380337/143‑1 ATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAG < 1:721081/133‑1 ATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCT < 1:679146/73‑1 TAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAG < 1:325156/132‑1 GAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGAC > 1:178264/1‑186 AAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAG < 1:338890/190‑1 AGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATA > 1:89654/1‑199 AGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGT < 1:14385/164‑1 GGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATATTTTTGAATTTATTGAATACTATAAGGG > 1:497709/1‑209 GGTGAGATAAATAAAGCAAAAAAGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGAT > 1:360054/1‑168 AGTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATATTTTTGAATTTATTGAATACTATAAGGGGGTGGGAGCTAGGTCCTGTTAGGGTTTTAC < 1:685670/217‑1 GTAACAGATATCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTG < 1:58329/107‑1 GTAAGATCCTTGCTGATATCGCCGTATTCGACAAAGTGGCTTTCGCTGCATTAGTTGAAAAAGCAAAATCTGCACTTTAATTTTAAAGTTTAGATAAAAAATAAGGGCGCTCATGAGCGTCCTTTTTATTATTGTTGATTTTCTGATTGATTGGCTATTTTTTCTTGTTTTGAATAATAGAAATAGAGCCAAATGAGTCCGATTGGTGAGATAAATAAAGCAAAAAAGTAACAGATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1234157‑1234393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taTCCATTCATTCTAATGAACATATTTGGTTAAGAGAATTATTACTTAATCGTCGAAATAAATTAGGTCTACAGTGCGCATTTTATGAAAAATTGGGTGTTGTGTATTCTTTTATTGATAAAGTCGAGACCATAGATCGTCGTTTGGATATTTTTGAATTTATTGAATACTATAAGGGGGTGGGAGCTAGGTCCTGTTAGGGTTTTAC > 1/1234997‑1235202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |