| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | 1 | 1,230,855 | (TGCCT)4→5 | intergenic (+91725/+162456) | unknown → / ← unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 1230833 | 0 (0.000) | 24 (0.280) +CTTGC |
16/376 | 2.9 | 100% | intergenic (+91703/+162478) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC |
| ? | 1 | 1230834 = | 0 (0.000) | intergenic (+91704/+162477) | unknown/unknown | tRNA‑Met‑CAT/tRNA‑Val‑GAC | |||||
TTCACCGTGGAAGAATTTTTAGACATTCTGAAAAAACAAGTGAGAAATCGCGAATTGAAATTATTGGGTGAGGCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1230595‑1230833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAAAGCTCTTTTCCCGAATTGTT > 1/1230834‑1231005 ||||| TTCACCGTGGAAGAATTTTTAGACATTCTGAAAAAACAAGTGAGAAATCGCGAATTGAAATTATTGGGTGAGGCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCATTAATAGGAGTAAAAAATATGCTTGCCTTGCCT < 1:483973/251‑1 ACATTCTGAAAAAACAAGTGAGAAATCGCGAATTGAAATTATTGGGTGAGGCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTA < 1:109985/250‑1 TTATTGGGTGAGGCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAA > 1:762537/1‑251 GCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAG > 1:651693/1‑251 GCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAG > 1:515156/1‑251 GCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACT < 1:563741/199‑1 GCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCAAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAAC > 1:446700/1‑198 AGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCAC > 1:230110/1‑224 GTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCT > 1:869215/1‑218 AATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCC > 1:416748/1‑165 GAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTT > 1:99769/1‑250 TAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAAC > 1:82494/1‑162 GAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCAC < 1:509339/186‑1 GAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCT > 1:125110/1‑152 CATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGC < 1:320664/251‑1 CAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACT > 1:330672/1‑249 TTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAAC < 1:697985/251‑1 TTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAcccaacttaaagctc < 1:137326/251‑16 CTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAcccaacttaaagc < 1:275169/234‑14 ATATTGTATAAAACAAAGTACACTTTGTACTTGATAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTCATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAcccaacttaaagc > 1:34500/1‑217 ATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAA > 1:42710/1‑151 GTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAcccaacttaaagctcttttcc < 1:734897/233‑22 GTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCT < 1:79286/78‑1 GTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACC > 1:71705/1‑193 GTAATAGGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAcccaac > 1:145351/1‑177 GGAGTAAAAAATATGCTTGCCTTGCCTTGCCTTGCCTTGCCTAAACT < 1:885899/47‑1 ||||| TTCACCGTGGAAGAATTTTTAGACATTCTGAAAAAACAAGTGAGAAATCGCGAATTGAAATTATTGGGTGAGGCGTAGTTCTGACAATTAAATGAGCTGAAATTACGCTAGCAGGAATCATCATTCAATAGATTTATTGATTTTTCCGACCGGCGTAGTTTCAGCTTTTTAACACTCGATATTGTATAAAACAAAGTACACTTTGTACTTGACAACCAGTAATAGGAGTAAAAAATATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/1230595‑1230833‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTTGCCTTGCCTTGCCTTGCCTAAACTAAACGTTAATTGCAAGCAAAATCTATCACTTTTCTTAAAAATTTATTCGGAGGATAAATGATCTCCGAAGAACTTTTCTCTCGTGACGGCGTTTCCGCTAACTCTGCACAACTTACCCAACTTAAAGCTCTTTTCCCGAATTGTT > 1/1230834‑1231005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |