New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 3 1 =0 (0.000)16 (0.290) 9/430 0.0 100% coding (1/645 nt) unknown Zona occludens toxin‑like phage protein
?4 = 454 0 (0.000)coding (192/192 nt) unknown Type II secretory pathway, component PulD

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGGTATCTGATGAAGATTG  >  3/1‑20
                                                                                                                                                                                                                                                        |                   
tgcttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAg                    >  1:323455‑M1/249‑250 (MQ=255)
tgcttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAg                    >  1:342356‑M1/249‑250 (MQ=255)
  cttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggtagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  >  1:34698‑M1/247‑250 (MQ=255)
  cttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  >  1:201908‑M1/247‑250 (MQ=255)
  cttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  >  1:743831‑M1/247‑250 (MQ=255)
  cttaccttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  >  1:872192‑M1/247‑250 (MQ=255)
       cttatgcgttttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCtg            >  1:795785‑M1/242‑251 (MQ=255)
                 ttgttattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCTGATGAAGATTg  <  1:131020‑M1/20‑1 (MQ=255)
                 ttggtattcgtcgtattccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCTGATGAAGATTg  <  1:264634‑M1/20‑1 (MQ=255)
                               attccgattataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCtg            >  1:60434‑M1/218‑227 (MQ=255)
                                     attataggttgaggattttatggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  <  1:787386‑M1/4‑1 (MQ=255)
                                                         tggcaatttcggcttatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCtga           >  1:658632‑M1/192‑202 (MQ=255)
                                                                       tatgtgggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  <  1:749558‑M1/4‑1 (MQ=255)
                                                                            gggtattccgggcagcggtaaatcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCTGATGAAGAt    <  1:403199‑M1/18‑1 (MQ=255)
                                                                                                 atcttatgaggtggtttcttcggtgattgttgagaattatctcaaaggaagacgcattgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAGGGTATCtg            <  1:540378‑M1/10‑1 (MQ=255)
                                                                                                                                                         ttgtaacgaatattgagggaataacagacgaaaaagtaagggagtattgtttaaacaaaaagaatgccaaggaagacgatttagggcaattaataAggg                  >  1:350362‑M1/96‑99 (MQ=255)
                                                                                                                                                                                                                                                        |                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGGTATCTGATGAAGATTG  >  3/1‑20

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.