| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 3 | 1 = | 0 (0.000) | 16 (0.290) | 9/430 | 0.0 | 100% | coding (1/645 nt) | unknown | Zona occludens toxin‑like phage protein |
| ? | 4 | = 454 | 0 (0.000) | coding (192/192 nt) | unknown | Type II secretory pathway, component PulD | |||||
CAATCTTCATCAGATACCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 3/20‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGACACAACCTCATAAGATTTACCGCTACCCGGTATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATGCGGCGAATAACAAAACGCATAAGATAAGCG < 4/454‑207 CAATCTTCATCAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATACCAA < 1:264634/251‑1CAATCTTCATCAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAA < 1:131020/251‑1 ATCTTCATCAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCC < 1:403199/190‑1 TCAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCA > 1:658632/1‑202 CAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAG > 1:795785/1‑251 CAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAAT > 1:60434/1‑227 CAGATACCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGAT < 1:540378/161‑1 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAG > 1:201908/1‑250 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAG > 1:743831/1‑250 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAG > 1:872192/1‑250 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAAT < 1:787386/215‑1 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATA < 1:749558/181‑1 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTACCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAG > 1:34698/1‑250 CCCTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAA > 1:350362/1‑99 CTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAGCa > 1:323455/1‑249 CTTATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGAAACCACCTCATAAGATTTACCGCTGCCCGGAATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATACGACGAATAACAAAACGCATAAGGTAAGCa > 1:342356/1‑249 CAATCTTCATCAGATACCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 3/20‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATTAATTGCCCTAAATCGTCTTCCTTGGCATTCTTTTTGTTTAAACAATACTCCCTTACTTTTTCGTCTGTTATTCCCTCAATATTCGTTACAATGCGTCTTCCTTTGAGATAATTCTCAACAATCACCGAAGACACAACCTCATAAGATTTACCGCTACCCGGTATACCCACATAAGCCGAAATTGCCATAAAATCCTCAACCTATAATCGGAATGCGGCGAATAACAAAACGCATAAGATAAGCG < 4/454‑207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |