| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 787675 = | 129 (1.470) | 5 (0.060) | 4/400 | 6.5 | 3.5% | coding (1144/1437 nt) | unknown | Pantothenate:Na+ symporter (TC 2.A.21.1.1) |
| ? | 1 | 788185 = | 157 (1.930) | coding (634/1437 nt) | unknown | Pantothenate:Na+ symporter (TC 2.A.21.1.1) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/787935‑787675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgaccgcactttCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCTAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCACA > 1/788185‑788432 GTCGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTT < 1:8923/249‑1 gGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGGTTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGA > 1:375151/2‑250 CGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGAC < 1:459915/251‑1 CGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGA > 1:57449/1‑250 TTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCA > 1:438561/1‑251 AGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTT > 1:802613/1‑251 GTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGAC > 1:212006/1‑198 GTGTTACCGCCTATCGTCGCGAGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTTCTATG > 1:190690/1‑204 GATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCG > 1:384228/1‑251 TTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAA < 1:143362/251‑1 ATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCCAATAAACGGGCG > 1:751534/1‑251 ATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAA < 1:333918/222‑1 CGCACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCAC > 1:213481/1‑135 CACTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACATTGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGG < 1:784510/169‑1 CTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCCAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCA > 1:277758/1‑250 CTTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGAT < 1:245659/77‑1 TTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCCAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCACA > 1:798724/1‑251 TTTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCT < 1:243998/183‑1 TTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCCAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCACA > 1:892865/1‑250 TTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGA > 1:740174/1‑166 TTCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCACACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCCAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCACA > 1:505504/1‑250 GTCGTGTTGTAGTGCCGGCTTTAACAGTGTCGGACAAAGTCATTCCAAGCCTAATGTTACAAGTGTTACCGCCTATCGTCGCGGGCATTTTCCTTGCCGCGCCGATGTCGGCAATCATGTCTACGGTGGATGCGCAGCTGATTCAATCTTCTTCCATTTTCGTGAAGGATTTATATTTAGCGACAAAACCACAGGCGGCGCAAAATCAAAAACGTATCGGGCGAATCTCCTCAATAATTACGTTAATTTTGACCGCACTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 1/787935‑787675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttgaccgcactttCTATGCCGCCCACCTGATAAATCACACCGACCAATAACACAATGGTGCCTAAAATCATCACTGTGCCTTGGATGGTATCCGTCAGTACCACCGCGCGGAAGCCGCCGACATAGGTATAAATCCCCACTGTCAGGGCAAAAATCAACAAGGCTTGGGTATAAGGAATGCCGATGGTAGTCTCTAATAAACGGGCGCCGCCGATAAACTGCACGGTCATGGCGGCAAAAAAGGCGATAAGCAACGCCACA > 1/788185‑788432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |