| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | = 1628697 | 129 (0.920) | 6 (0.040) | 4/434 | 3.6 | 7.2% | coding (628/744 nt) | C7Y58_07860 | hypothetical protein |
| ? | CP028101 | = 1628907 | 27 (0.200) | coding (418/744 nt) | C7Y58_07860 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTTTATTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/1628525‑1628697‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagaAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGTGAATGTAATAATGAAAAAGCTAAAAGGTATTATTCTCCTTCTCTATATAAATTTATTTATAATCCAAATCTATCACAGATGGGAGTATATAT < CP028101/1628907‑1628738 GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAGTCTCAGGGGAAATTTCTTTTTCACTTCTTTTATTAGAAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGT > 1:632479/1‑251GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTTTATGAGAAACAAATTAATAAATCTTCATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGT > 1:532381/1‑251GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTATAATAGTAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCC > 2:403041/1‑226GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTATAATAGAAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCC < 1:403041/226‑1 TTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTTTATTAGAAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGTGAATGTAATAATGAAAAAGCTAAAAGGTATTATTCTCCTTCTCTATATAAATTTATTTA < 2:632479/251‑1 CTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTTTATTAGAAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGTGAATGTAATAATGAAAAAGCTAAAAGGTATTATTCTCCTTCTCTATATAAATTTATTTATAATCCAAATCTATCACAGATGGGAGTATATAT < 2:532381/251‑1 GTTCCAGTTGTATAACCATTTTTTAATTCTTTTTCTTCCATTTCAATATCTCTCTCTTATTTTTTCTTTTTCATATTAGGTCTAAATGAAGTCTTTAAATCAAAACCTTTACTCAATATTTTATTTTCATTAGAAATCTCAGGGGAAATTTCTTTTTCACTTCTTTTATTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/1628525‑1628697‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagaAAAAAATTAATAAATCTTAATATCAATAAAGATGATATTATATTAAATGAGCCAATCCTTTTAATAGAATATATTGGTGAATGTAATAATGAAAAAGCTAAAAGGTATTATTCTCCTTCTCTATATAAATTTATTTATAATCCAAATCTATCACAGATGGGAGTATATAT < CP028101/1628907‑1628738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |