| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | = 134236 | 220 (1.570) | 3 (0.020) | 3/420 | 3.8 | 1.2% | coding (363/534 nt) | C7Y58_00665 | 50S ribosomal protein L6 |
| ? | CP028101 | = 134652 | 280 (2.100) | coding (370/399 nt) | C7Y58_00670 | 30S ribosomal protein S8 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/134132‑134236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaaaaagttGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT < CP028101/134652‑134471 GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGT < 1:213756/170‑1GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGT > 2:213756/1‑170 ACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT > 1:26573/1‑251 GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP028101/134132‑134236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaaaaagttGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT < CP028101/134652‑134471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |