New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP028101 = 134236220 (1.570)3 (0.020) 3/420 3.8 1.2% coding (363/534 nt) C7Y58_00665 50S ribosomal protein L6
?CP028101 = 134652 280 (2.100)coding (370/399 nt) C7Y58_00670 30S ribosomal protein S8
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/134132‑134236
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaaaaagttGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT  <  CP028101/134652‑134471
                                                                                                                                                                                                                                                                                               
GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGT                                                                                                                       <  1:213756/170‑1
GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGT                                                                                                                       >  2:213756/1‑170
                                    ACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTTGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT  >  1:26573/1‑251
                                                                                                                                                                                                                                                                                               
GGTTCAGGTGGTCTCTTAGCTCTAATGTTAGCTGCAACTTGACCTACTAATTCTTTTTCTACTCCATCTATATGGATAGTAGTATTCTTTTCAACAGAAAAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP028101/134132‑134236
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagaaaaagttGGTGGAGAAGTCCTTGCATTTGTTTGGTAATAAAAACTTAGGAGGTGTACATTAATGTCAAGAGTAGGTAAAAAACCTATAGCTGTGCCTTCTGGAGTTGATTTTTCAGTAAAAGACAATGTTGTTACTGTAAAAGGACCAAAGGGTACATTAACAAAAGAATTTAATAATAATATAACTAT  <  CP028101/134652‑134471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.