New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	593405 =	325 (1.410)	3 (0.010)	3/282	16.5	0.97%	coding (2354/2829 nt)	C7Y58_02990	DUF3427 domain‑containing protein
	?	CP028101	593422 =	302 (1.380)					coding (2371/2829 nt)	C7Y58_02990	DUF3427 domain‑containing protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGAAAACCATTGTTAAAATTCAAATTTAGATACCAAAATGCTTCTTGCTTTGTATATTCTCCAAAAAGTTTTACTGACTCTTTTACAAAATTATTATAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/593507‑593405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataattttGTAAAAGAGTCAGTAAAACTTTTTGGAGAATATACAAAGCAAGAAGCATTTTGGTATCTAAATTT  >  CP028101/593422‑593486                                                                                                                                                                          TGAAAACCATTGTTAAAATTCAAATTTAGATACCAAAATGCTTCTTGCTTTGTATATTCTCCAAAAAGTTTTACTGACTCTTTTACAAAATTATTATAATTTTGTAAAAGAGTCAGTAAAACTCTTTGGAGAATATACAAAGCAAGAggc                    >  1:1028819/1‑147             TTAAAATTCAAATTTAGATACCAAAATGCTTCTTGCTTTGTATATTCTCCAAAAAGTTTTACTGACTCTTTTACAAAATTATTATAATTTTGTAAAAGAGTCAGTAAAACTTTTTGGAGAATATACAAAGCAAGAAGCATTTTGGTATCT        >  1:1226459/1‑150                   TTCAAATTTAGATACCAAAATGCTTCTTGCTTTGTATATTCTCCAAAAAGTTTTACTGACTCTTTTACAAAATTATTATAATTTTGTAAAAGAGTCAGTAAAACTTTTTGGAGAATATACAAAGCAAGAAGCATTTTGGTATCTAAATTT  >  1:1479238/1‑150                                                                                                                                                                          TGAAAACCATTGTTAAAATTCAAATTTAGATACCAAAATGCTTCTTGCTTTGTATATTCTCCAAAAAGTTTTACTGACTCTTTTACAAAATTATTATAATTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/593507‑593405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataattttGTAAAAGAGTCAGTAAAACTTTTTGGAGAATATACAAAGCAAGAAGCATTTTGGTATCTAAATTT  >  CP028101/593422‑593486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.