mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.38.1
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 516,032 | G→A | G86D (GGT→GAT) | C7Y58_02640 → | transcriptional repressor |
| RA | 761,062 | A→G | K479K (AAA→AAG) | C7Y58_03755 → | hemolysin activator protein precursor |
| RA | 875,381 | A→G | K85E (AAA→GAA) | C7Y58_04335 → | autotransporter domain‑containing protein |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP028101 | = 336796 | NA (NA) | 279 (1.240) +TTTT |
119/290 | 0.2 | 100% | noncoding (28/1558 nt) | C7Y58_01750 | 16S ribosomal RNA |
| ? | CP028101 | = 534770 | 0 (0.000) | noncoding (26/1558 nt) | C7Y58_02725 | 16S ribosomal RNA | |||||
| * | ? | CP028101 | = 493674 | NA (NA) | 133 (0.900) +54 bp |
61/190 | 0.7 | NA | coding (429/456 nt) | C7Y58_02580 | OmpA family protein |
| ? | CP028101 | 493722 = | NA (NA) | coding (1/7146 nt) | C7Y58_02585 | autotransporter domain‑containing protein | |||||
| * | ? | CP028101 | = 900717 | NA (NA) | 170 (0.790) +CCACTTTATC |
91/278 | 0.7 | NA | pseudogene (930/1276 nt) | C7Y58_04430 | ISL3 family transposase |
| ? | CP028101 | 900717 = | NA (NA) | pseudogene (930/1276 nt) | C7Y58_04430 | ISL3 family transposase | |||||