New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP028101	515137 =	535 (1.130)	16 (0.040)	8/262	22.0	3.4%	intergenic (+50/‑81)	C7Y58_02630/C7Y58_02635	autotransporter domain‑containing protein/N‑acetyltransferase
	?	CP028101	515178 =	445 (1.070)					intergenic (+91/‑40)	C7Y58_02630/C7Y58_02635	autotransporter domain‑containing protein/N‑acetyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCTACAATTTTCATCATCACTTCAAAATCGGGATCTTTTATATAAACTAATTCCATAAGTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/515274‑515137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccttcttttttgttaTAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  CP028101/515178‑515288                                                                                                                                                                                                                                                           CTCTACAATTTTCATCATCACTTCAAAATCGGGATCTTTTATATAAACTAATTCCATAAGTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAATAAAAAAGAAGGTTGAAAAAAAACCTTCTTTTTTGTTGTGATTATAAAAA                                                                                                     >  2:3214307/1‑150                     CTTCAAAATCGGGATCTTTTATATAAACTAATTCCATGAGTCTCCTCCTTCCAATTTTTATTTCTTTTTTATAATTGTAACAAAAAAGAAGATTGAAAAACAACCTTCTTTTTTGTTATACTTATAAAAAATAAATAAAAATTGGAAGGA                                                                                 >  2:2271262/1‑150                                           ATAAACTAATTCCATAATTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTA                                                           <  1:2907329/150‑1                                           ATAAACTAATTCCATAAGTTTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTA                                                           <  1:2907323/150‑1                                           ATAAACTAATTCCATAAGTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTA                                                           <  1:2907324/150‑1                                               ACTAATTCCATAAGTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATA                                                       >  2:1567001/1‑150                                                                        CAATTTTTATTTATTTTTTATCATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGAATTATGGAAGTAGTTGATATAAAAGACCCCGATTTTGAAGTGATGA                              >  2:2750464/1‑150                                                                        CAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGA                              >  2:2461918/1‑150                                                                                 TTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATCTTGAAGTGATGATGAAAATTG                     >  1:3076326/1‑150                                                                                                 ATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGA     >  1:119184/1‑150                                                                                                 ATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGA     >  1:119187/1‑150                                                                                                 ATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCAGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGA     >  1:119180/1‑150                                                                                                    ACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  2:2371110/1‑150                                                                                                    ACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  2:2371111/1‑150                                                                                                    ACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  2:2371113/1‑150                                                                                                    ACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTATAATTATAAAAAATAAACAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  1:863272/1‑150                                                                                                                                                                                                                                                           CTCTACAATTTTCATCATCACTTCAAAATCGGGATCTTTTATATAAACTAATTCCATAAGTCTCCTCCTTCCAATTTTTATTTATTTTTTATAATTATAACAAAAAAGAAGGTTGAAAAACAACCTTCTTTTTTGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP028101/515274‑515137 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaccttcttttttgttaTAATTATAAAAAATAAATAAAAATTGGAAGGAGGAGACTTATGGAATTAGTTTATATAAAAGATCCCGATTTTGAAGTGATGATGAAAATTGTAGAGATAGAGCAAGAAAC  >  CP028101/515178‑515288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.