New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen36_14	47623 =	135 (0.740)	69 (0.390) +TCC	48/292	4.5	51.1%	intergenic (+108/–)	argS/–	Arginine‑‑tRNA ligase/–
	?	Xen36_14	= 47761	0 (0.000)					intergenic (+246/–)	argS/–	Arginine‑‑tRNA ligase/–
Rejected: Coverage evenness skew score above cutoff.

ATGTGAATAAGGTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_14/47612‑47761                                                                                                                                                       |              gttcaaggggagTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAACCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAgg               >  1:3645129/12‑150 (MQ=25) gctcaaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGG‑GTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgg               >  1:1779565/12‑150 (MQ=18)  ctcaaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGG‑GTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAggg              >  1:2107377/11‑149 (MQ=18)  ctcaaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTCCAAAAGAGCCCCCAATCGCTAAAGCTCAAGGGGTTTAAA‑GGAATACAGTCGGCTTGCTTGCGCAACAACTGCAAAAGAATCCCTAATCACTAAAGCTCGAgga              >  1:3242060/11‑149 (MQ=9)  ctcaaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAgggg             <  1:1516922/140‑3 (MQ=21)   tcaaggggagTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTTCA‑AGAATACAGTTGGCTTGCTTTCGCAGCACCTGCAAAAGAGCCAATAATCGCTAACGCTCAAgggg             >  1:1612093/10‑148 (MQ=17)    caaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggag           <  1:798780/142‑5 (MQ=18)    caaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGATAAAGTTCAAggggag           >  1:777452/9‑146 (MQ=18)     aaggggagTTAAGGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggag           <  1:3544919/142‑5 (MQ=21)      aggggagTTAAGGAATACATTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggagtt         <  1:482965/144‑7 (MQ=18)          aGGTTAAAGAATACAGTTTGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTGAA‑GGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggagttaaag     <  1:2013531/150‑11 (MQ=21)           agTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGG‑GTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAggggagttaagg     >  1:593935/2‑140 (MQ=21)           agTTAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGG‑GTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAggggagttaagg     >  1:593936/2‑140 (MQ=21)           agTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAATTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgggggttaaagg     <  1:409055/149‑11 (MQ=21)           agTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAATTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgggggttaaagg     <  1:409057/149‑11 (MQ=21)            gTTAAGGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCCTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggagttaaagaa   >  1:1605777/1‑138 (MQ=18)            gTTAAGGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGGGG‑GTTAAAGGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAggggagttaaggaa   >  1:1694219/1‑138 (MQ=18)              tAAAGAATACAGTTTGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAGGGGAGTTAA‑GGAATACGGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgggggttaaaggaat  <  1:774790/150‑14 (MQ=18)                    gtACATTTGGTTTGTTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑AGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAggggg            <  1:588881/132‑4 (MQ=18)                      aCAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGTTCCGAATCGCGAGAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCA‑CAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAggggagttaaagaat  <  1:1839772/141‑14 (MQ=14)                       cAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCTAAAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgg               <  1:1329322/128‑1 (MQ=255)                       cAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCACTAATCGCGAAAGCTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAgg               <  1:2162589/128‑1 (MQ=255)                                                                                                                                                       |              ATGTGAATAAGGTTAAAGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGTTCAAGGGGAGTTAA‑GGAATACAGTTGGCTTGCTTGCGCAGCAACTGCAAAAGAGCCCCTAATCGCTAAAGCTCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_14/47612‑47761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.