New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen36_19 1 =0 (0.000)929 (0.930) 170/188 0.2 100% intergenic (–/‑211) –/Xen36_02569 –/hypothetical protein
?Xen36_19 = 8034 0 (0.000)intergenic (+503/–) Xen36_02580/– hypothetical protein/–

Only 100 of 946 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCATTAAAA  >  Xen36_19/1‑150
                                                                                              |                                                                                                                                                     
tttataaatctttttaaaaccctttttagggggtgtttgaaccttagagggacatgcatttgagattttaaaggcaactttttgtcaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTg                                                                                                >  1:1661008‑M1/95‑150 (MQ=255)
ttataaatctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTg                                                                                                <  1:957197‑M1/56‑1 (MQ=255)
ttataaatctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGCCAACTTTTTGTAACCATAAAGGCAACTTTTTg                                                                                                >  1:3491559‑M1/95‑150 (MQ=255)
 tataaatctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGt                                                                                               <  1:1601611‑M1/57‑1 (MQ=255)
     aatctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAAcc                                                                                           >  1:1825021‑M1/90‑150 (MQ=255)
       tctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagatttaaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCAt                                                                                         <  1:3630129‑M1/63‑1 (MQ=255)
        ctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATa                                                                                        <  1:641828‑M1/64‑1 (MQ=255)
        ctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATa                                                                                        <  1:1865935‑M1/64‑1 (MQ=255)
        ctttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATa                                                                                        <  1:2161207‑M1/64‑1 (MQ=255)
         tttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATaa                                                                                       <  1:1840572‑M1/65‑1 (MQ=255)
         tttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATaa                                                                                       <  1:854150‑M1/65‑1 (MQ=255)
          ttttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATaaa                                                                                      <  1:2057984‑M1/66‑1 (MQ=255)
           tttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAg                                                                                     <  1:1933235‑M1/67‑1 (MQ=255)
           tttaaaaccctttttagggggtgtttgaaccttagagggacaatgcagttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAg                                                                                     >  1:1323972‑M1/84‑150 (MQ=255)
            ttaaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAgg                                                                                    <  1:1417634‑M1/68‑1 (MQ=255)
             taaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAGCCATAAAGGCAACTTTTTGTAACCATAAAGGc                                                                                   <  1:2191123‑M1/69‑1 (MQ=255)
              aaaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCa                                                                                  <  1:1525047‑M1/70‑1 (MQ=255)
              aaaaccctttttagggggtgttcgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCa                                                                                  <  1:3353531‑M1/70‑1 (MQ=255)
               aaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCaa                                                                                 <  1:2702624‑M1/71‑1 (MQ=255)
               aaaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACCTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCaa                                                                                 <  1:1491273‑M1/71‑1 (MQ=255)
                aaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtagccataaaGGCAACTTTTTGTAACCATAAAGACAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAAc                                                                                >  1:1157959‑M1/79‑150 (MQ=255)
                aaccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTATTGTAACCATAAAGGCAAc                                                                                <  1:2559513‑M1/72‑1 (MQ=255)
                 accctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACt                                                                               <  1:3007297‑M1/73‑1 (MQ=255)
                  ccttctttagggggtgtttgaaccttagagggacaatgtatttgagactttaaaggcgactttttgtaaccgtaaaGGCTACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACtt                                                                              >  1:2103265‑M1/77‑150 (MQ=255)
                  ccctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACtt                                                                              <  1:1038902‑M1/74‑1 (MQ=255)
                   cctttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACttt                                                                             <  1:3014777‑M1/75‑1 (MQ=255)
                      ttttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTa                                                                          >  1:791482‑M1/73‑150 (MQ=255)
                       tttagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataatGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTaa                                                                         <  1:3165051‑M1/79‑1 (MQ=255)
                         tagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATa                                                                       <  1:2620533‑M1/81‑1 (MQ=255)
                         tagggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATa                                                                       <  1:35591‑M1/81‑1 (MQ=255)
                          agggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccatgaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAg                                                                      >  1:3071359‑M1/69‑150 (MQ=255)
                          agggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAg                                                                      <  1:1640339‑M1/82‑1 (MQ=255)
                           gggggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGc                                                                     >  1:2681468‑M1/68‑150 (MQ=255)
                            ggggtgtttgaaccttagatggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCg                                                                    >  1:704214‑M1/67‑150 (MQ=255)
                             gggtgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGa                                                                   <  1:489411‑M1/85‑1 (MQ=255)
                                tgtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTCTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGtt                                                                <  1:1889171‑M1/88‑1 (MQ=255)
                                 gtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTATTAGCGAGTTg                                                               <  1:329306‑M1/89‑1 (MQ=255)
                                 gtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTg                                                               <  1:1176191‑M1/89‑1 (MQ=255)
                                 gtttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTg                                                               <  1:1549528‑M1/89‑1 (MQ=255)
                                  tttgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGc                                                              <  1:2475064‑M1/90‑1 (MQ=255)
                                    tgaatcttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCt                                                            <  1:2605275‑M1/92‑1 (MQ=255)
                                    tgaagcttagagggacaatgcatttgagattttcaaggcaacttttcgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCt                                                            <  1:518593‑M1/92‑1 (MQ=255)
                                    tgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCt                                                            <  1:3429993‑M1/92‑1 (MQ=255)
                                    tgaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCt                                                            >  1:550806‑M1/59‑150 (MQ=255)
                                     gaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGagttgtctt                                                           <  1:3692240‑M1/93‑5 (MQ=255)
                                     gaaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCtt                                                           <  1:2845983‑M1/93‑1 (MQ=255)
                                      aaccttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCttt                                                          >  1:2920789‑M1/57‑150 (MQ=255)
                                       accttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCACAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTa                                                         >  1:2224828‑M1/56‑150 (MQ=255)
                                         cttagatggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAGAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATg                                                       >  1:3467773‑M1/54‑150 (MQ=255)
                                         cttagagggacgatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATg                                                       >  1:1360891‑M1/54‑150 (MQ=255)
                                         cttagagggacaacgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATg                                                       <  1:1210086‑M1/97‑1 (MQ=255)
                                          ttagagggacaatgcgtttgagattgtaaaggcaattttttgtaaccataagGGCAGCTTTTTGTAACTATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATgg                                                      >  1:3190577‑M1/53‑150 (MQ=255)
                                          ttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAGAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATgg                                                      >  1:919637‑M1/53‑150 (MQ=255)
                                          ttagagggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATgg                                                      <  1:1797505‑M1/98‑1 (MQ=255)
                                              agggacaatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTAc                                                  >  1:467540‑M1/49‑150 (MQ=255)
                                                   caatgcatttgagattttaaaggcagctttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCAGAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTa                                             >  1:2142924‑M1/44‑150 (MQ=255)
                                                   caatgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTa                                             >  1:2421071‑M1/44‑150 (MQ=255)
                                                     atgcatttgagattttaaaggcaactttttgtaaccataaaGGTAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTCTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGTCTTTATGGTTACAATTATg                                           >  1:1974067‑M1/42‑150 (MQ=255)
                                                      tgcatttgagctgttaaaggcaactgttggcaaccataaaGGCAACGTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTGTTTGTAACCATAAAGGCAACTTGTTAATAGCGAGTTGCCTTTATGGTTACAATTATGc                                          >  1:2010093‑M1/41‑150 (MQ=255)
                                                      tgcatttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGc                                          <  1:2283424‑M1/110‑1 (MQ=255)
                                                         atttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCtat                                       <  1:2878923‑M1/113‑1 (MQ=255)
                                                         atttgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCtat                                       >  1:1721857‑M1/38‑150 (MQ=255)
                                                            tgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCtattat                                    <  1:2211114‑M1/116‑1 (MQ=255)
                                                            tgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCtattat                                    >  1:591882‑M1/35‑150 (MQ=255)
                                                            tgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCtattat                                    <  1:1581201‑M1/116‑1 (MQ=255)
                                                            tgagattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAAACATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTCCAATTATTCtattat                                    <  1:611003‑M1/116‑1 (MQ=255)
                                                              agattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAg                                  <  1:89062‑M1/118‑1 (MQ=255)
                                                               gattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAgg                                 >  1:2394583‑M1/32‑150 (MQ=255)
                                                               gattttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAgg                                 <  1:3317278‑M1/119‑1 (MQ=255)
                                                                attttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGt                                <  1:43288‑M1/120‑1 (MQ=255)
                                                                attttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGt                                >  1:3271161‑M1/31‑150 (MQ=255)
                                                                 ttttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATCGGtt                               <  1:2509980‑M1/121‑1 (MQ=255)
                                                                 ttttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGtt                               <  1:1771032‑M1/121‑1 (MQ=255)
                                                                 ttttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGtt                               <  1:2728466‑M1/121‑1 (MQ=255)
                                                                  tttaaaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGttt                              <  1:1624452‑M1/122‑1 (MQ=255)
                                                                      aaggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTCTGGTTACAATTATGCTATTATAGGTTTTAAt                          <  1:3588307‑M1/126‑1 (MQ=255)
                                                                       aggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAAtt                         >  1:405234‑M1/24‑150 (MQ=255)
                                                                        ggcaactttttgtaaccataaaGGCGACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTCACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTCATTg                        <  1:819700‑M1/128‑1 (MQ=255)
                                                                        ggcaactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTg                        <  1:2122241‑M1/128‑1 (MQ=255)
                                                                          caactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGaa                      >  1:3126611‑M1/21‑150 (MQ=255)
                                                                           aactttttgtaaccatagaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAAt                     >  1:2253654‑M1/20‑150 (MQ=255)
                                                                           aactttttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAAt                     >  1:2030152‑M1/20‑150 (MQ=255)
                                                                                tttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTc                >  1:3372574‑M1/15‑150 (MQ=255)
                                                                                tttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTc                >  1:736121‑M1/15‑150 (MQ=255)
                                                                                tttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACCTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTc                >  1:1461706‑M1/15‑150 (MQ=255)
                                                                                 ttgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCt               >  1:2075990‑M1/14‑150 (MQ=255)
                                                                                  tgtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCtt              >  1:667417‑M1/13‑150 (MQ=255)
                                                                                   gtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAAtttt                  >  1:1072656‑M1/12‑145 (MQ=255)
                                                                                   gtaaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTta             >  1:3233022‑M1/12‑150 (MQ=255)
                                                                                    taaccataaaGGCAACTTTTTGTAACCATAAAGNCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTtat            >  1:1384613‑M1/11‑150 (MQ=255)
                                                                                     aaccataaaGGCAACTTTTTGTAACCATAAAGGCAACTTCTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTtata           <  1:2760380‑M1/141‑1 (MQ=255)
                                                                                      accataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATATGTTTTAATTGAATTTTTCTTatat          <  1:3735040‑M1/142‑1 (MQ=255)
                                                                                      accataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTatat          >  1:1003695‑M1/9‑150 (MQ=255)
                                                                                         ataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCGTAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCAt       >  1:2804318‑M1/6‑150 (MQ=255)
                                                                                         ataaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATatcct       <  1:3528368‑M1/145‑3 (MQ=255)
                                                                                          taaaGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACCTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCAtt      >  1:1278947‑M1/5‑150 (MQ=255)
                                                                                          taaaGGCAACTTTCTGTAACCATAAAGGCAACTTTTTGTAACCATAAATGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCAtt      >  1:3773716‑M1/5‑150 (MQ=255)
                                                                                             aGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTATCCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCATTaaa   >  1:1236408‑M1/2‑150 (MQ=255)
                                                                                              ggCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCATTaaaa  >  1:1570691/1‑150 (MQ=255)
                                                                                              ggCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTAAAGGTTTTAATTGAATTTTTCTTATATCATTaaaa  <  1:3093505/150‑1 (MQ=255)
                                                                                              |                                                                                                                                                     
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTGTAACCATAAAGGCAACTTTTTAATAGCGAGTTGCCTTTATGGTTACAATTATGCTATTATAGGTTTTAATTGAATTTTTCTTATATCATTAAAA  >  Xen36_19/1‑150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.