New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen36_21 1 =0 (0.000)123 (0.520) 51/174 0.2 100% intergenic (–/‑94) –/Xen36_02588 –/hypothetical protein
?Xen36_31 = 1147 0 (0.000)coding (749/807 nt) Xen36_02616 IS3 family transposase IS655

Only 100 of 123 total aligned reads displayed.

CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Xen36_21/149‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttttagacagttttcatgtgtagatttttaaatgccactggcgtcaaatactgtaatgaaGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCAA  <  Xen36_31/1147‑1075
                                                                                                                                                                                                                              
CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAGTCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAG                                                                          >  1:3496335/1‑150
CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAG                                                                          <  1:2089855/150‑1
CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAG                                                                          >  1:3487928/1‑150
CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAG                                                                          <  1:618201/150‑1
   ATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAAT                                                                       >  1:1973921/1‑150
    TGCGACTAAAATCATTGTACTAGCTCGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATG                                                                      >  1:1059041/1‑150
    TGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATG                                                                      >  1:1059038/1‑150
    TGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATG                                                                      >  1:2882255/1‑150
      CGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTG                                                                    >  1:834103/1‑150
       GACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGG                                                                   <  1:1475432/150‑1
       GACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCCCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGG                                                                   <  1:453535/150‑1
        ACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATCTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGT                                                                  <  1:1437773/150‑1
           AAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTA                                                               >  1:2585115/1‑150
           AAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTA                                                               >  1:76661/1‑150
            AAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAA                                                              >  1:462471/1‑150
               TCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAAT                                                           <  1:1798437/150‑1
                CATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATT                                                          >  1:1041364/1‑150
                 ATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTG                                                         >  1:3638044/1‑150
                 ATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATCTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTG                                                         <  1:3202227/150‑1
                  TTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGT                                                        <  1:2120781/150‑1
                  TTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGT                                                        <  1:3331675/150‑1
                       CTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCCAAAATTGTTGTAC                                                   <  1:2209774/150‑1
                       CTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATCTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTAC                                                   >  1:3090791/1‑150
                       CTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATCTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTAC                                                   >  1:1895679/1‑150
                        TAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAATAATTTTTTAGACAATTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACC                                                  <  1:3431556/150‑1
                        TAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACC                                                  <  1:502766/150‑1
                        TAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACC                                                  <  1:2575965/150‑1
                        TAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACC                                                  >  1:1294002/1‑150
                        TAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACC                                                  <  1:13410/150‑1
                         AGCTAGTAATAGACTGAGTAATCTCCGCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATGGTTGTACCA                                                 <  1:3574988/150‑1
                          GCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAA                                                >  1:205941/1‑150
                          GCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAA                                                >  1:2918196/1‑150
                          GCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAA                                                >  1:1191411/1‑150
                          GCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAA                                                >  1:2635956/1‑150
                           CTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTCTATCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAAT                                               >  1:3362214/1‑150
                             AGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTT                                             >  1:175760/1‑150
                             AGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTT                                             >  1:2625051/1‑150
                               taacAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAACGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTAC                                           <  1:1839062/146‑1
                               TAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTAC                                           <  1:1196020/150‑1
                                AATAGACTGAGTAGTCTCCTCATGCTGTTATCTCCTTTTAATGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACg                                          >  1:1596099/1‑149
                                AATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTAATGGTCTGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACg                                          >  1:1596103/1‑149
                                AATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTAATGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACg                                          >  1:3023177/1‑149
                                 ATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCATTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACAT                                         <  1:2005569/150‑1
                                  TAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATA                                        <  1:3150548/150‑1
                                  TAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATA                                        <  1:2163948/150‑1
                                  TAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATA                                        <  1:3150550/150‑1
                                   AGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAA                                       >  1:1023704/1‑150
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAAT                                      >  1:1285533/1‑150
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAAT                                      <  1:2779691/150‑1
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAAT                                      <  1:2779692/150‑1
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAAT                                      <  1:2779694/150‑1
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAAT                                      <  1:721330/150‑1
                                    GACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGCTGTACCAATTTACATAAT                                      <  1:721332/150‑1
                                     ACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATC                                     <  1:2193589/150‑1
                                      cttAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCA                                    <  1:1276249/147‑1
                                      CTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCA                                    >  1:1821610/1‑150
                                         AGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAAT                                 <  1:709833/150‑1
                                         AGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAAT                                 <  1:2774368/150‑1
                                                  CTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTT                        >  1:563223/1‑150
                                                   TCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTGCATAATCAAATAATTCTGTTT                       >  1:1818522/1‑150
                                                   TCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTT                       >  1:3095759/1‑150
                                                     ATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCT                     >  1:846892/1‑150
                                                     ATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATAATGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCT                     >  1:1990861/1‑150
                                                     ATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGGGTAGATTTTTAAATGCCACTGGCGTCGAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACAGAATCAAATAATTCTGTTTCT                     <  1:636463/150‑1
                                                        CTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAAC                  <  1:1028253/150‑1
                                                         aagctgtagcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACT                 <  1:775538/135‑1
                                                          tgtggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTNTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTG                >  1:3539915/14‑150
                                                           gtggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCGAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTCCCAATTTACATAATCAAATAATTCTGTTTCTAACTGT               >  1:153869/13‑150
                                                           gtggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGT               >  1:2615892/13‑150
                                                           gtggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGT               >  1:153866/13‑150
                                                           gtggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGT               >  1:2615895/13‑150
                                                           gctgtagcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGT               >  1:2188142/14‑150
                                                             tgtagcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTC             <  1:3258044/139‑1
                                                             ggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTC             >  1:3604957/11‑150
                                                             ggaatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTC             <  1:1936039/140‑1
                                                             ATCTCCTTTTGTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTC             <  1:3471802/150‑1
                                                              gtagcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCT            >  1:3365217/11‑150
                                                               aatgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTA           >  1:3221001/9‑150
                                                                atgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAA          >  1:2499002/8‑150
                                                                agcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAA          >  1:2888117/9‑150
                                                                agcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAACAATTCTGTTTCTAACTGTTCTAA          >  1:113058/9‑150
                                                                 tgttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAG         >  1:3462827/7‑150
                                                                 gcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATCTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTACCTGTTCTAAG         >  1:912049/8‑150
                                                                 gcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATCTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAG         >  1:912048/8‑150
                                                                 gcataccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATCTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAG         >  1:2836231/8‑150
                                                                  gttaaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGT        >  1:3337041/6‑150
                                                                  CTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGT        >  1:2462008/1‑150
                                                                  CTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGT        >  1:2092198/1‑150
                                                                  CTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTC                            <  1:1291586/130‑1
                                                                    taccTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTT      <  1:1680929/146‑1
                                                                    taaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTT      >  1:3628370/4‑150
                                                                     accTTGGTATGTCAACAATTTTGTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTT     <  1:3715670/147‑1
                                                                     aaATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTT     <  1:3395914/148‑1
                                                                       cTTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCA   <  1:402579/149‑1
                                                                       ATTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCCGTTTCTAACTGTTCTAAGTTTTCA   >  1:567378/1‑150
                                                                       ATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCA   >  1:3428371/1‑150
                                                                       ATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCA   <  1:3295592/150‑1
                                                                       ATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTAAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCA   <  1:2924024/150‑1
                                                                       ATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTAAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCA   <  1:1209899/150‑1
                                                                        TTGGTATGTCAACATTTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAAGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCAA  <  1:2300787/150‑1
                                                                                                                                                                                                                              
CACATGCGACTAAAATCATTGTACTAGCTAGTAATAGACTGAGTAATCTCCTCATGCTGTTATCTCCTTTTATTGGTATGTCAACAATTTTTTAGACAGTTTTCATGTGTAGATTTTTAAATGCCACTGGCGTCAAATACTGTAATGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Xen36_21/149‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttttagacagttttcatgtgtagatttttaaatgccactggcgtcaaatactgtaatgaaGAATGTGGTCTAAAATTGTTGTACCAATTTACATAATCAAATAATTCTGTTTCTAACTGTTCTAAGTTTTCAA  <  Xen36_31/1147‑1075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.