New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen36_12 = 77NA (NA)103 (0.740)
+GTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGA
46/210 2.3 41.6% intergenic (–/+544) –/gabR –/HTH‑type transcriptional regulatory protein GabR
?Xen36_3 250715 = 206 (0.980)intergenic (+685/–) recR/– Recombination protein RecR/–

Only 100 of 165 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_12/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAGTTGTTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAAATGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAA‑CGTAACTATAAGTTACAAACATTATTTAGTATTTATGAGCTA  >  Xen36_3/250715‑250863
                                                                                           ||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                                      
cacctgttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAGAAAGTTATTGACT                                                                                                                                         <  1:2301104/136‑1
cacctgttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACT                                                                                                                                         <  1:284381/136‑1
  cctgttcccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTA                                                                                                                                       <  1:1923300/138‑1
         ccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAACATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTA                                                                                                                                >  1:74649/6‑150
         ccatgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTA                                                                                                                                >  1:3310787/6‑150
          catgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAA                                                                                                                               >  1:2673874/5‑150
           atgCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAAT                                                                                                                              <  1:51718/147‑1
             gCCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAA                                                                                                                            >  1:1049460/2‑150
              CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAA                                                                                                                           >  1:2751296/1‑150
              CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAA                                                                                                                           >  1:606968/1‑150
               CGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAA                                                                                                                          >  1:2149744/1‑150
                   CACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTA                                                                                                                      >  1:3280211/1‑150
                    ACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGATTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTAT                                                                                                                     <  1:1660598/150‑1
                    ACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTAT                                                                                                                     >  1:705890/1‑150
                    ACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTAT                                                                                                                     <  1:3041000/150‑1
                    ACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTAT                                                                                                                     <  1:3041003/150‑1
                     CAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATA                                                                                                                    >  1:946382/1‑150
                     CAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATA                                                                                                                    >  1:490502/1‑150
                           tgAAGCTCCTTAGCGTCGATGGTAGTCGAACTTATGTTCCGCTAGAGTAGAACATTGCCAGGCATTTTTTTAACCAAATTTTGGTGAAAAAAGAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAAT                                                                                                              <  1:1998120/148‑1
                           TTAAGCTCCTTATCGTCGATGGTAGTCGAACTTATGTTCCGCTAGAGTAGAACATTGCCAGGCAGTTTTTTAATCAAATTTTGGTGAAAAAAGAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAAT                                                                                                              <  1:1998117/150‑1
                           TTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAAT                                                                                                              <  1:1369720/150‑1
                             AAGCTTCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAGAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTC                                                                                                            <  1:715890/150‑1
                             AAGCTCCTTAGCTTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTGATCGAATTTTGGTTAAAAAATAGAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTC                                                                                                            <  1:715889/150‑1
                             AAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAGAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTC                                                                                                            <  1:715894/150‑1
                             AAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAGAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTC                                                                                                            <  1:2777830/150‑1
                             AAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTC                                                                                                            <  1:2493075/150‑1
                                CTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTG                                                                                                         <  1:3068287/150‑1
                                CTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTG                                                                                                         <  1:2783875/150‑1
                                   CTTATCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCG                                                                                                      <  1:3102576/150‑1
                                   CTTATCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCG                                                                                                      <  1:338701/150‑1
                                        CGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAG                                                                                                 >  1:1904336/1‑150
                                         GTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGA                                                                                                >  1:2989754/1‑150
                                         GTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGA                                                                                                >  1:1431149/1‑150
                                          TCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAA                                                                                               <  1:2489094/150‑1
                                           CGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAA                                                                                              >  1:583115/1‑150
                                           CGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGATAAGAAA                                                                                              >  1:1405883/1‑150
                                           CGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGATAAGAAA                                                                                              >  1:3005637/1‑150
                                              TGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATTAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAAtg                                                                                           >  1:1305100/1‑148
                                               GGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAAtga                                                                                          <  1:439188/150‑4
                                                  AGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACA                                                                                      >  1:2522312/1‑150
                                                   GTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATATAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACAT                                                                                     >  1:1850015/1‑150
                                                    TCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATT                                                                                    <  1:3323725/150‑1
                                                         CTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAA                                                                               <  1:2851781/150‑1
                                                         CTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAA                                                                               <  1:974770/150‑1
                                                          TTACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAAC                                                                              <  1:1291134/150‑1
                                                            ACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTG                                                                            <  1:398606/150‑1
                                                            ACGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTG                                                                            <  1:2315875/150‑1
                                                             CGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGA                                                                           >  1:951570/1‑150
                                                             CGTTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGA                                                                           >  1:1711299/1‑150
                                                               TTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAAT                                                                         >  1:3588446/1‑150
                                                               TTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAAT                                                                         <  1:3767889/150‑1
                                                               TTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAAT                                                                         >  1:2148892/1‑150
                                                               TTCCGCTAGAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAAT                                                                         <  1:3209692/150‑1
                                                                       GAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATAT                                                                 <  1:1177810/150‑1
                                                                       GAGTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTCAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGATAA‑TGAACATTGAAAACTGAATGACAATAT                                                                 <  1:1574313/150‑1
                                                                         GTAGAACGTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAAGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGT                                                               >  1:1094075/1‑150
                                                                                GTTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTT                                                        <  1:458706/150‑1
                                                                                 TTGCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTA                                                       >  1:494971/1‑150
                                                                                   GCCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAAT                                                     <  1:3276518/150‑1
                                                                                    CCAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATT                                                    <  1:1023117/150‑1
                                                                                     CAGGCAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTC                                                   <  1:1208655/150‑1
                                                                                         CAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAA                                               >  1:291465/1‑150
                                                                                         CAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAA                                               >  1:909250/1‑150
                                                                                         CAGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAA                                               >  1:1819074/1‑150
                                                                                          AGTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAA                                              <  1:1363198/150‑1
                                                                                           GTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCC                                                  >  1:2907874/1‑145
                                                                                           GTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCC                                                  >  1:1146927/1‑145
                                                                                           GTTTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCC                                                  >  1:1936859/1‑145
                                                                                             TTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAac                                           >  1:1539632/1‑148
                                                                                             TTTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAACATGTCAACGTTAATTCCAAAAAac                                           >  1:659754/1‑148
                                                                                              TTTTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAacg                                          >  1:1661232/1‑147
                                                                                                TTAATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAacgta                                        >  1:3563768/1‑145
                                                                                                  AATCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATCGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAac                                           <  1:3683937/145‑3
                                                                                                    TCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTA                                    >  1:695695/1‑150
                                                                                                    TCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTA                                    >  1:502138/1‑150
                                                                                                    TCAAATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTA                                    >  1:2769823/1‑150
                                                                                                        ATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAG                                >  1:778783/1‑150
                                                                                                        ATTTTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAG                                >  1:1647627/1‑150
                                                                                                           TTGGTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTA                             <  1:2664220/150‑1
                                                                                                              GTTAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAA                          <  1:2111018/150‑1
                                                                                                                TAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAAC                        <  1:1206949/150‑1
                                                                                                                TAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAAC                        <  1:1854484/150‑1
                                                                                                                TAAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAAC                        <  1:1854486/150‑1
                                                                                                                 AAAAAATAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACA                       >  1:2071233/1‑150
                                                                                                                    AAATAAAAGGACAATATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTA                    <  1:1516479/150‑1
                                                                                                                       TAAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTT                 <  1:3487576/150‑1
                                                                                                                        AAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTA                <  1:3184827/150‑1
                                                                                                                        AAAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTA                <  1:2256458/150‑1
                                                                                                                         AAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAG               <  1:687340/150‑1
                                                                                                                         AAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAG               <  1:2768415/150‑1
                                                                                                                         AAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAG               <  1:1253771/150‑1
                                                                                                                         AAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAG               <  1:2768419/150‑1
                                                                                                                         AAAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAG               <  1:98858/150‑1
                                                                                                                          AAGGACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGT              <  1:1623311/150‑1
                                                                                                                             GACAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGTATT           <  1:1918871/150‑1
                                                                                                                               CAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGTATTTA         <  1:872611/150‑1
                                                                                                                               CAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGTATTTA         <  1:872616/150‑1
                                                                                                                               CAAGATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTAAATGACAATATGTCAACGTCAATTCCAAAAAACGCAACTATAAGTTACAAACATTCTTTAGTATTTA         >  1:2022052/1‑150
                                                                                                                                  GATGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGCATTTATGA      <  1:205371/150‑1
                                                                                                                                    TGAAAAAAGTTATTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAA‑TGAACATTGAAAACTGAATAACAATATGTCAACGTTAATTCCAAAAAACGTAACTATAAGTTACAAACATTATTTAGTATTTATGAGC    <  1:1623052/150‑1
                                                                                           ||||||||||||||||||||||||||||||||||||||||||||                                                                                                                                                      
‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCGAACACAGAAGTTAAGCTCCTTAGCGTCGATGGTAGTCGAACTTACGTTCCGCTAGAGTAGAACGTTGCCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen36_12/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAGTTGTTGACTTAAATGTTAATAAAATGTATAATTAATTCTTGTCGGTAAGAAAAATGAACATTGAAAACTGAATGACAATATGTCAACGTTAATTCCAAAAA‑CGTAACTATAAGTTACAAACATTATTTAGTATTTATGAGCTA  >  Xen36_3/250715‑250863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.