New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_136 1 =0 (0.000)91 (0.940) 45/218 0.4 100% intergenic (–/+298) –/intA_4 –/Prophage integrase IntA
?Xen14_170 = 580 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 129 total aligned reads displayed.

CAGACAGACCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_170/432‑619
                                                                                                                                                    |                                                                                                                                                     
  gacagacCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGc                                                                                                                                                    <  1:183009/150‑1 (MQ=255)
  gacagacCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGc                                                                                                                                                    <  1:183013/150‑1 (MQ=255)
      gacCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTAcc                                                                                                                                                >  1:3099846/1‑150 (MQ=255)
       acCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCg                                                                                                                                               <  1:1492435/150‑1 (MQ=255)
       acCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCg                                                                                                                                               <  1:253389/150‑1 (MQ=255)
          ggggAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCgcag                                                                                                                                            <  1:171518/150‑4 (MQ=255)
           gggAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGa                                                                                                                                           >  1:3065886/1‑150 (MQ=255)
           gggAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGa                                                                                                                                           <  1:219396/150‑1 (MQ=255)
              aaGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCt                                                                                                                                        >  1:3558762/1‑150 (MQ=255)
                gagaATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGAt                                                                                                                                          <  1:3911427/146‑1 (MQ=255)
                gagaATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCttt                                                                                                                                      >  1:1625967/1‑150 (MQ=255)
                  gaATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTct                                                                                                                                    <  1:345654/150‑1 (MQ=255)
                  gaATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTct                                                                                                                                    >  1:2418564/1‑150 (MQ=255)
                  gaATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTct                                                                                                                                    <  1:1391389/150‑1 (MQ=255)
                   aaTTTTTTGCCGTTAAAGTGCAGGAAAGATTAAGATAATACGGCATCAATTTTCGTCTAAATAAGCCAGCTTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTctg                                                                                                                                   <  1:3321062/150‑1 (MQ=255)
                     ttttttGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTctgct                                                                                                                                 >  1:4237310/1‑150 (MQ=255)
                       ttttGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCtga                                                                                                                               >  1:1070935/1‑150 (MQ=255)
                        tttGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGACATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCtgat                                                                                                                              <  1:973083/150‑1 (MQ=255)
                             cGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAAGAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCt                                                                                                                         <  1:1933063/150‑1 (MQ=255)
                                  aaGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAGCGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAgg                                                                                                                    >  1:2563894/1‑150 (MQ=255)
                                  aaGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAgg                                                                                                                    <  1:2946423/150‑1 (MQ=255)
                                   agggCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGa                                                                                                                   <  1:4205499/147‑1 (MQ=255)
                                   aGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGa                                                                                                                   <  1:1492383/150‑1 (MQ=255)
                                     tGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAAc                                                                                                                 <  1:2662286/150‑1 (MQ=255)
                                     tGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAAc                                                                                                                 <  1:910984/150‑1 (MQ=255)
                                     tGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAAc                                                                                                                 <  1:910983/150‑1 (MQ=255)
                                     tGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAAc                                                                                                                 <  1:1590402/150‑1 (MQ=255)
                                      gCAGGAAAGATTAAAATAGTACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACt                                                                                                                <  1:1349348/150‑1 (MQ=255)
                                      gCAGGAAAGATTAAAATAATACGGCATCCAGTTTCGTCCAAATAAGCAAGCGTCACATCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACt                                                                                                                >  1:2967513/1‑150 (MQ=255)
                                       cAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactg                                                                                                               >  1:3176881‑M2/1‑110 (MQ=255)
                                       cAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactg                                                                                                               >  1:3218972‑M2/1‑110 (MQ=255)
                                       cAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCCCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctacagtagatctttctgctgatgacctgaaggaactg                                                                                                               >  1:1747016‑M2/1‑110 (MQ=255)
                                          gAAAGACTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcag                                                                                                            >  1:1458063‑M2/1‑107 (MQ=255)
                                             aGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAGGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggca                                                                                                         >  1:295920‑M2/1‑104 (MQ=255)
                                              gATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTACCGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgctgacctgaaggaactgcaggcag                                                                                                        <  1:4141108‑M2/150‑48 (MQ=255)
                                              gATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcag                                                                                                        <  1:4050275‑M2/150‑48 (MQ=255)
                                              gATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcag                                                                                                        <  1:4050274‑M2/150‑48 (MQ=255)
                                               aTTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcaga                                                                                                       >  1:224729‑M2/1‑102 (MQ=255)
                                               aTTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcaga                                                                                                       >  1:224730‑M2/1‑102 (MQ=255)
                                               aTTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcaga                                                                                                       >  1:224731‑M2/1‑102 (MQ=255)
                                                ttAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaa                                                                                                      <  1:2101374‑M2/150‑50 (MQ=255)
                                                     ataataCGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggca                                                                                                 >  1:4210645‑M2/1‑96 (MQ=255)
                                                     ataataCGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggca                                                                                                 >  1:3544287‑M2/1‑96 (MQ=255)
                                                          aCGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcatt                                                                                            <  1:74764‑M2/150‑60 (MQ=255)
                                                             gCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattact                                                                                         >  1:1418912‑M2/1‑88 (MQ=255)
                                                              cATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattacta                                                                                        <  1:408854‑M2/150‑64 (MQ=255)
                                                              cATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattacta                                                                                        <  1:408853‑M2/150‑64 (MQ=255)
                                                              cATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattacta                                                                                        <  1:408852‑M2/150‑64 (MQ=255)
                                                               aTCAAGTTTCGTCCAAATAAGCCAGCGTCANCTCATCTTAACGGAAAGGTTGAACGTTCNCANAAGACAGACAAAGCAGAGTCTNAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactat                                                                                       >  1:3713768‑M2/1‑86 (MQ=255)
                                                                      ttCGTCCAAATAAGTCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactggg                                                                                <  1:1410355‑M2/150‑72 (MQ=255)
                                                                      ttCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactggg                                                                                >  1:3550663‑M2/1‑79 (MQ=255)
                                                                              aaTAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctggtgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtctg                                                                        >  1:2001518‑M2/1‑71 (MQ=255)
                                                                                 aaGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtctgaac                                                                     >  1:1046227‑M2/1‑68 (MQ=255)
                                                                                  aGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtctgaacc                                                                    <  1:2936516‑M2/150‑84 (MQ=255)
                                                                                         gTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactaggaacgtctgaaccgccccgg                                                             >  1:273394‑M2/1‑60 (MQ=255)
                                                                                                 agtgtgccacttcagttgaacgttcccaaAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggta                                                     >  1:1978091‑M2/15‑52 (MQ=255)
                                                                                                  gtgtgccacttcagttgaacgttcccaAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaa                                                    <  1:3337523‑M2/137‑100 (MQ=255)
                                                                                                   tgtgccacttcagttgaacgttcccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaa                                                   >  1:2341571‑M2/13‑50 (MQ=255)
                                                                                                   cTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcaggatggcagcattactataactgggaacgtctg                                                                        <  1:4056584‑M2/129‑80 (MQ=255)
                                                                                                      gccacttcagttgaacgttCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaact                                                <  1:1765630‑M2/141‑104 (MQ=255)
                                                                                                      gccacttcagttgaacgttCCCAAAAGACAGACAAAGCAGAGTATTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaact                                                <  1:26681‑M2/141‑104 (MQ=255)
                                                                                                         acttcagttgaacGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccg                                             <  1:1926294‑M2/144‑107 (MQ=255)
                                                                                                              agtTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacgataaaactccgatgga                                        <  1:510324‑M2/149‑112 (MQ=255)
                                                                                                              agtTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacgataaaactccgatgga                                        <  1:504799‑M2/149‑112 (MQ=255)
                                                                                                                ttGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagc                                      >  1:1799501‑M2/1‑37 (MQ=255)
                                                                                                                 tGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcg                                     <  1:1001567‑M2/150‑115 (MQ=255)
                                                                                                                 tGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcg                                     <  1:1200131‑M2/150‑115 (MQ=255)
                                                                                                                    aCGTTCCCAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgcta                                  <  1:146229‑M2/150‑118 (MQ=255)
                                                                                                                          ccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtctgaacc                                                                    <  1:3583517‑M2/110‑84 (MQ=255)
                                                                                                                          ccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttga                            <  1:1272804‑M2/150‑124 (MQ=255)
                                                                                                                          ccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttga                            <  1:785114‑M2/150‑124 (MQ=255)
                                                                                                                          ccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttga                            <  1:785113‑M2/150‑124 (MQ=255)
                                                                                                                          ccAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttga                            <  1:1272802‑M2/150‑124 (MQ=255)
                                                                                                                           cAAAAGACAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaac                                                         <  1:1345237‑M2/120‑95 (MQ=255)
                                                                                                                            aaaaGGCAGACAAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaac                          <  1:2233674‑M2/150‑126 (MQ=255)
                                                                                                                                gacagacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgc                      <  1:2384651‑M2/150‑130 (MQ=255)
                                                                                                                                 acagacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgct                     >  1:3110200‑M2/1‑20 (MQ=255)
                                                                                                                                  cagacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctg                    >  1:2570069‑M2/1‑19 (MQ=255)
                                                                                                                                  cagacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctg                    <  1:3203116‑M2/150‑132 (MQ=255)
                                                                                                                                  cagacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctg                    <  1:3203117‑M2/150‑132 (MQ=255)
                                                                                                                                    gacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaatttgctgag                  >  1:208552‑M2/1‑17 (MQ=255)
                                                                                                                                    gacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgag                  >  1:1101043‑M2/1‑17 (MQ=255)
                                                                                                                                    gacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgag                  >  1:1101040‑M2/1‑17 (MQ=255)
                                                                                                                                    gacaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgag                  >  1:1101038‑M2/1‑17 (MQ=255)
                                                                                                                                     acaAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgaga                 <  1:1253444‑M2/150‑135 (MQ=255)
                                                                                                                                      caAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaa                <  1:3504209‑M2/150‑136 (MQ=255)
                                                                                                                                      caAAGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaa                <  1:3639263‑M2/150‑136 (MQ=255)
                                                                                                                                        aaGCAGATTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaa              >  1:1641441‑M2/1‑13 (MQ=255)
                                                                                                                                         aGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaac             >  1:2614119‑M2/1‑12 (MQ=255)
                                                                                                                                         aGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaact                         >  1:11342‑M2/1‑12 (MQ=255)
                                                                                                                                         aGCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaact                         >  1:11338‑M2/1‑12 (MQ=255)
                                                                                                                                          gCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaaca            <  1:3324936‑M2/150‑140 (MQ=255)
                                                                                                                                          gCAGAGTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctga                   <  1:3453981‑M2/143‑133 (MQ=255)
                                                                                                                                             ggttcttAcactaccgtaggtttttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacacca         >  1:3824230‑M2/4‑8 (MQ=255)
                                                                                                                                             gagTCTTAtgctactgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacacca         >  1:3796612‑M2/1‑8 (MQ=255)
                                                                                                                                             gagTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacacca         <  1:4255976‑M2/150‑143 (MQ=255)
                                                                                                                                              agTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacaccat        >  1:3982675‑M2/1‑7 (MQ=255)
                                                                                                                                              agTCTTAcgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacaccat        >  1:1961736‑M2/1‑7 (MQ=255)
                                                                                                                                                    acgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaaacaccatactccg  >  1:3906522‑M2/1‑1 (MQ=255)
                                                                                                                                                    acgctaccgtagatctttctgctgatgacctgaaggaactgcaggcagaatggcagcattactataactgggaacgtcctcatagcgctcacaacggtaaaactccgatggagcgctactttgaacttgctgagaaa               <  1:3545556‑M2/137‑137 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CAGACAGACCGGGGAAGAGAATTTTTTGCCGTTAAAGTGCAGGAAAGATTAAAATAATACGGCATCAAGTTTCGTCCAAATAAGCCAGCGTCACCTCATCTTAACGGAAAGGTTGAACGTTCCCAAAAGACAGACAAAGCAGAGTCTTACGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_170/432‑619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.