New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_136 1 =0 (0.000)91 (0.940) 45/218 0.4 100% intergenic (–/+298) –/intA_4 –/Prophage integrase IntA
?Xen14_170 = 580 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATACTCCGA  >  Xen14_136/1‑150
                                                                                                              |                                                                                                                                                     
caggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTg                                                                                                                >  1:3176881‑M1/111‑150 (MQ=255)
caggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTg                                                                                                                >  1:3218972‑M1/111‑150 (MQ=255)
caggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTg                                                                                                                >  1:3149756‑M1/111‑150 (MQ=255)
caggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcaccccatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACAGTAGATCTTTCTGCTGATGACCTGAAGGAACTg                                                                                                                >  1:1747014‑M1/111‑150 (MQ=255)
caggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcaccccatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACAGTAGATCTTTCTGCTGATGACCTGAAGGAACTg                                                                                                                >  1:1747016‑M1/111‑150 (MQ=255)
   gaaagactaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcag                                                                                                             >  1:1458063‑M1/108‑150 (MQ=255)
     aagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcaggc                                                                                                           <  1:3783404‑M1/45‑1 (MQ=255)
      agattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaggacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcaggca                                                                                                          >  1:295920‑M1/105‑150 (MQ=255)
       gattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaccggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGCTGACCTGAAGGAACTgcaggcag                                                                                                         <  1:4141108‑M1/47‑1 (MQ=255)
       gattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcaggcag                                                                                                         <  1:4050275‑M1/47‑1 (MQ=255)
       gattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcaggcag                                                                                                         <  1:4050274‑M1/47‑1 (MQ=255)
        attaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGa                                                                                                        >  1:224730‑M1/103‑150 (MQ=255)
        attaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGa                                                                                                        >  1:224731‑M1/103‑150 (MQ=255)
        attaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGa                                                                                                        >  1:224729‑M1/103‑150 (MQ=255)
         ttaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGaa                                                                                                       <  1:2101374‑M1/49‑1 (MQ=255)
           aaaataatacggcatcaagtttcgtccaaacaagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacaaacaaaacagagtcttaCGCTACAGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATg                                                                                                     <  1:3378449‑M1/51‑1 (MQ=255)
            aaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTNANGACCTGAAGGAACTGCAGGCAGAATgg                                                                                                    <  1:4236545‑M1/52‑1 (MQ=255)
              ataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGgca                                                                                                  >  1:3544287‑M1/97‑150 (MQ=255)
              ataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGgca                                                                                                  >  1:4210645‑M1/97‑150 (MQ=255)
              ataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGgca                                                                                                  >  1:3544286‑M1/97‑150 (MQ=255)
                   acggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCAtt                                                                                             <  1:74764‑M1/59‑1 (MQ=255)
                      gcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACt                                                                                          >  1:1418912‑M1/89‑150 (MQ=255)
                       catcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACta                                                                                         <  1:408852‑M1/63‑1 (MQ=255)
                       catcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACta                                                                                         <  1:408853‑M1/63‑1 (MQ=255)
                       catcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACta                                                                                         <  1:408854‑M1/63‑1 (MQ=255)
                        atcaagtttcgtccaaataagccagcgtcanctcatcttaacggaaaggttgaacgttcncanaagacagacaaagcagagtctnaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACtat                                                                                        >  1:3713768‑M1/87‑150 (MQ=255)
                               ttcgtccaaataagtcagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTggg                                                                                 <  1:1410355‑M1/71‑1 (MQ=255)
                               ttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTggg                                                                                 >  1:3550663‑M1/80‑150 (MQ=255)
                                     caaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACtgggaatgtc                                                                           <  1:2983674‑M1/77‑5 (MQ=255)
                                       aataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGGTGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACgtctg                                                                         >  1:2001518‑M1/72‑148 (MQ=255)
                                          aagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGaacgtctgaac                                                                      >  1:1046227‑M1/69‑145 (MQ=255)
                                           agccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGgaacgtctgaacc                                                                     <  1:2936516‑M1/83‑7 (MQ=255)
                                                  gtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTAtaactaggaacgtctgaaccgccccgg                                                              >  1:273394‑M1/61‑137 (MQ=255)
                                                          agtgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTa                                                      >  1:1978091‑M1/53‑150 (MQ=255)
                                                           gtgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaa                                                     <  1:3337523‑M1/99‑1 (MQ=255)
                                                           gtgtaccacttcatttgaacgttccaaaaagacaaacaaagcagaatcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTAACAACGGTaa                                                     >  1:2229249‑M1/52‑150 (MQ=255)
                                                            tgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaaa                                                    >  1:2341571‑M1/51‑150 (MQ=255)
                                                            cttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGGATGGCAGCATTACTATAACTGGGAACgtctg                                                                         <  1:4056584‑M1/79‑3 (MQ=255)
                                                              tgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                  >  1:3917453‑M1/49‑150 (MQ=255)
                                                               gccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACt                                                 <  1:1765630‑M1/103‑1 (MQ=255)
                                                               gccacttcagttgaacgttcccaaaagacagacaaagcagagtattaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACt                                                 <  1:26681‑M1/103‑1 (MQ=255)
                                                                  acttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCg                                              >  1:1536884‑M1/45‑150 (MQ=255)
                                                                  acttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCg                                              <  1:1926294‑M1/106‑1 (MQ=255)
                                                                      cagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                  <  1:2808561‑M1/102‑1 (MQ=255)
                                                                       agttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGATAAAACTCCGATGGa                                         <  1:504799‑M1/111‑1 (MQ=255)
                                                                       agttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGATAAAACTCCGATGGa                                         <  1:510324‑M1/111‑1 (MQ=255)
                                                                        gttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAg                                        <  1:2340846‑M1/112‑1 (MQ=255)
                                                                         ttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgc                                       >  1:1799501‑M1/38‑150 (MQ=255)
                                                                          tgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgcg                                      <  1:1200131‑M1/114‑1 (MQ=255)
                                                                          tgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgcg                                      <  1:1001567‑M1/114‑1 (MQ=255)
                                                                            aacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCt                                    <  1:2529665‑M1/116‑1 (MQ=255)
                                                                             acgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTa                                   <  1:146228‑M1/117‑1 (MQ=255)
                                                                             acgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTa                                   <  1:146229‑M1/117‑1 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGgaacgtctgaacc                                                                     <  1:3583517‑M1/83‑7 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGa                             <  1:1272802‑M1/123‑1 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGa                             <  1:1272803‑M1/123‑1 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGa                             <  1:785113‑M1/123‑1 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGa                             <  1:1272804‑M1/123‑1 (MQ=255)
                                                                                   ccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGa                             <  1:785114‑M1/123‑1 (MQ=255)
                                                                                    caaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAAc                                                          <  1:1345237‑M1/94‑1 (MQ=255)
                                                                                     aaaaggcagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                           <  1:2233674‑M1/125‑1 (MQ=255)
                                                                                     aaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                           >  1:3240382‑M1/26‑150 (MQ=255)
                                                                                         gacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGc                       <  1:2384651‑M1/129‑1 (MQ=255)
                                                                                          acagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCt                      >  1:3110200‑M1/21‑150 (MQ=255)
                                                                                           cagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTg                     <  1:3203117‑M1/131‑1 (MQ=255)
                                                                                           cagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTg                     <  1:3203116‑M1/131‑1 (MQ=255)
                                                                                           cagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTg                     >  1:2570069‑M1/20‑150 (MQ=255)
                                                                                             gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAATTTGCTgag                   >  1:208552‑M1/18‑150 (MQ=255)
                                                                                             gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                   >  1:1101038‑M1/18‑150 (MQ=255)
                                                                                             gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                   >  1:1101039‑M1/18‑150 (MQ=255)
                                                                                             gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                   >  1:1101040‑M1/18‑150 (MQ=255)
                                                                                             gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                   >  1:1101043‑M1/18‑150 (MQ=255)
                                                                                              acaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgaga                  <  1:1253444‑M1/134‑1 (MQ=255)
                                                                                               caaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                 <  1:3504209‑M1/135‑1 (MQ=255)
                                                                                               caaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                 <  1:3639263‑M1/135‑1 (MQ=255)
                                                                                               caaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGATAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                 <  1:4054009‑M1/135‑1 (MQ=255)
                                                                                                 aagcagattcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaaa               >  1:1641441‑M1/14‑150 (MQ=255)
                                                                                                  agcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACt                          >  1:11342‑M1/13‑138 (MQ=255)
                                                                                                  agcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACt                          >  1:11339‑M1/13‑138 (MQ=255)
                                                                                                  agcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACt                          >  1:11338‑M1/13‑138 (MQ=255)
                                                                                                  agcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAac              >  1:2614119‑M1/13‑150 (MQ=255)
                                                                                                   gcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTga                    <  1:3453981‑M1/132‑1 (MQ=255)
                                                                                                   gcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAaca             <  1:3324936‑M1/139‑1 (MQ=255)
                                                                                                      ggttcttaCACTACCGTAGGTTTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCa          >  1:3824230‑M1/9‑150 (MQ=255)
                                                                                                      gagtcttaTGCTACTGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCa          >  1:3796612‑M1/9‑150 (MQ=255)
                                                                                                      gagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCa          <  1:4255976‑M1/142‑1 (MQ=255)
                                                                                                       agtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCAt         >  1:1961733‑M1/8‑150 (MQ=255)
                                                                                                       agtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCAt         >  1:1961736‑M1/8‑150 (MQ=255)
                                                                                                       agtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCAt         >  1:3982675‑M1/8‑150 (MQ=255)
                                                                                                             aCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaa                <  1:3545556‑M1/136‑1 (MQ=255)
                                                                                                             aCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATACTCCg   >  1:3906522‑M1/2‑150 (MQ=255)
                                                                                                              cGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTCGAACTTGCTGAGAAAACACCATACTCCGa  >  1:862999/1‑150 (MQ=255)
                                                                                                              cGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTCGAACTTGCTGAGAAAACACCATACTCCGa  >  1:864001/1‑150 (MQ=255)
                                                                                                              cGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTCGAACTTGCTGAGAAAACACCATACTCCGa  >  1:864002/1‑150 (MQ=255)
                                                                                                              |                                                                                                                                                     
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATACTCCGA  >  Xen14_136/1‑150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.