| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_126 | 2440 = | NA (NA) | 43 (0.430) +TCTCCTTGCCTTTCGGCACGTAAGAGGCTAACCTAGATTTGCCGTTCATAGATTGAGCCTCAGAT |
26/166 | 0.5 | 100% | intergenic (+148/–) | Xen14_04727/– | hypothetical protein/– |
| ? | Xen14_99 | = 6045 | 0 (0.000) | intergenic (‑484/–) | Xen14_04599/– | hypothetical protein/– | |||||
AGGAAAAGAAGTTGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_99/5903‑6045 | aGGAAAAGAAGTTGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgag > 1:3408513‑M2/1‑143 (MQ=255)aGGAAAAGAAGTTGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTACTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgag > 1:3408514‑M2/1‑143 (MQ=255) aaaaGAAGTTGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgag < 1:3881723‑M2/147‑8 (MQ=255) tGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTTCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatg > 1:1595287‑M2/1‑131 (MQ=255) cATTGATCTATTGGATAGTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaac < 1:3092001‑M2/150‑23 (MQ=255) gTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagc > 1:1210656‑M2/1‑111 (MQ=255) gTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagc < 1:441488‑M2/150‑40 (MQ=255) gTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagc < 1:4086977‑M2/150‑40 (MQ=255) gTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagc > 1:1210659‑M2/1‑111 (MQ=255) gAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctct > 1:2408333‑M2/1‑107 (MQ=255) ttGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttac > 1:4093661‑M2/1‑104 (MQ=255) gctgcGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgt < 1:1562349‑M2/150‑49 (MQ=255) gcGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgcc > 1:3996547‑M2/1‑99 (MQ=255) tGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaa > 1:4125824‑M2/1‑90 (MQ=255) tCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgt > 1:2726395‑M2/1‑82 (MQ=255) tCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgt > 1:2269368‑M2/1‑82 (MQ=255) tCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgt > 1:2726394‑M2/1‑82 (MQ=255) cTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgta > 1:2002752‑M2/1‑81 (MQ=255) tGCCTCAGGCATGAACAACAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtat > 1:4154114‑M2/1‑80 (MQ=255) gCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatg < 1:3576638‑M2/150‑72 (MQ=255) ccTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgg < 1:2524237‑M2/150‑73 (MQ=255) cTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCATCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgga < 1:2341807‑M2/150‑74 (MQ=255) cTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCATCCTGCAAGAAGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgga < 1:2341806‑M2/150‑74 (MQ=255) gCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccac < 1:4021949‑M2/150‑79 (MQ=255) aTGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAGCATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtataggtccacca < 1:3448835‑M2/150‑81 (MQ=255) gAACACCAAAAGGCAGATAGAAAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccaca > 1:3762909‑M2/1‑68 (MQ=255) cacCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatat < 1:1030329‑M2/150‑86 (MQ=255) ccAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattg < 1:2411017‑M2/150‑88 (MQ=255) cAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgc < 1:4072282‑M2/150‑89 (MQ=255) aaaaGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgca < 1:2573743‑M2/150‑90 (MQ=255) aGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaattttta < 1:1345721‑M2/150‑97 (MQ=255) gATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttat > 1:885680‑M2/1‑53 (MQ=255) gATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttat > 1:3463032‑M2/1‑53 (MQ=255) gaAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctctt < 1:2491954‑M2/150‑104 (MQ=255) gaAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcct < 1:4040083‑M2/150‑104 (MQ=255) gaAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacatgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctctt < 1:3755919‑M2/150‑104 (MQ=255) aaaaGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttt > 1:3466334‑M2/1‑46 (MQ=255) aaaaGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttt > 1:46051‑M2/1‑46 (MQ=255) aaaaGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatccatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttt > 1:152493‑M2/1‑46 (MQ=255) ccccAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaa > 1:1915996‑M2/1‑41 (MQ=255) ccccAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaa > 1:2073936‑M2/1‑41 (MQ=255) ccccAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaa > 1:308489‑M2/1‑41 (MQ=255) cAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatat > 1:3783481‑M2/1‑38 (MQ=255) tAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattc < 1:1351058‑M2/150‑117 (MQ=255) tAACATTACGCGTCCTGCAAGACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatat > 1:904478‑M2/1‑34 (MQ=255) gACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcga < 1:3944560‑M2/150‑137 (MQ=255) gACGCTTAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctctt > 1:3584194‑M2/1‑14 (MQ=255) tAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgcct < 1:2352826‑M2/150‑143 (MQ=255) tAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgcct < 1:2352818‑M2/150‑143 (MQ=255) tAACATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgcct < 1:2352813‑M2/150‑143 (MQ=255) cATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgt < 1:2816369‑M2/150‑146 (MQ=255) cATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgt < 1:872734‑M2/150‑146 (MQ=255) cATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgt < 1:872735‑M2/150‑146 (MQ=255) cATTAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtc < 1:2138726‑M2/131‑127 (MQ=255) ttAatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgtgg > 1:2703613‑M2/1‑3 (MQ=255) ttAatctgaggctcaatctacgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgtgg < 1:3932408‑M2/150‑148 (MQ=255) aatctgaggctcaatctatgaacggcaaatctaggttagcctcttacgtgccgaaaggcaaggagatgtatgggtccaccacatattgcaatttttattctcttttaaaatatattccacgggcgtcattagtgcgagcgccttgtgggg > 1:3759816‑M2/1‑1 (MQ=255) | AGGAAAAGAAGTTGGCATTGATCTATTGGATAGTTAGAATTGCTGCGGGTGCTTGAGGCTATCTGCCTCAGGCATGAACACCAAAAGGCAGATAGAGAAAAGCCCCAGTTAACATTACGCGTCCTGCAAGACGCTTAACATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_99/5903‑6045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |