| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_12 | = 189 | 97 (1.170) | 74 (0.990) | 41/294 | 0.6 | 43.4% | intergenic (–/+139) | –/Xen14_01540 | –/hypothetical protein |
| ? | Xen14_21 | = 59 | NA (NA) | intergenic (–/+18) | –/add | –/Adenosine deaminase | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGGCGCGGCAACGGTAT > Xen14_21/1‑207 | ttccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGt > 1:702684‑M2/98‑150 (MQ=255)ttccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGt > 1:702683‑M2/98‑150 (MQ=255) tccctatcctggcagcccgtttacgggccgtaattaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGtt < 1:3805387‑M2/54‑1 (MQ=255) tccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTgtc > 1:278997‑M2/97‑149 (MQ=255) tccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGtt > 1:3597771‑M2/97‑150 (MQ=255) ccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAAACTCCGGCTATGCCGGAGGATATTTATTtgtct > 1:4107665‑M2/96‑148 (MQ=255) tctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaagtgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagTCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATttgtctg < 1:1348393‑M2/56‑4 (MQ=255) cctatcctggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATttgtctg < 1:423249‑M2/56‑4 (MQ=255) cctatccgggcagcccgtttacgggccgtatgtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATttgtctg > 1:3124997‑M2/95‑147 (MQ=255) cctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagTCTTATAGGCGCATTTGAAAAACCTCCGGCGATGCCGGAGGATATTTATttgtctg < 1:3686759‑M2/56‑4 (MQ=255) cctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATttgtctg < 1:1652051‑M2/56‑4 (MQ=255) cctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTAc > 1:3134972‑M2/95‑150 (MQ=255) ctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACt > 1:881192‑M2/94‑150 (MQ=255) atccgggcagcccgtttacgggccgtaagtaacgaagttgaatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTtatttgtctgtag > 1:681854‑M2/92‑144 (MQ=255) cttacggcccgtaaacgggctgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTcgcg > 1:2492071‑M2/89‑150 (MQ=255) cgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATatttatttgtctgtagaaa < 1:408308‑M2/62‑10 (MQ=255) cgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATatttatttgtctgtagaaa < 1:1555255‑M2/62‑10 (MQ=255) cgggcagcccgtttacgggccgtaagtaacaaagttggatgcaaatgtcagatcgtgtgcgcatgttcgggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGTAGGATatttatttgtctgtagaaa > 1:4031847‑M2/89‑141 (MQ=255) agcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGAc > 1:2389123‑M2/84‑150 (MQ=255) gcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcggctcgtgtgcgcctgttcgggcgcggctggtaagagagTCTTATAGGCGCAGTTGAAAAACCTACGGCTATGCAGGaggatatttatttgttcgtagagaagtagg > 1:3852322‑M2/83‑136 (MQ=255) gcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACt > 1:2003676‑M2/83‑150 (MQ=255) cgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACtttt > 1:2496995‑M2/80‑150 (MQ=255) cgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACtttt > 1:2827710‑M2/80‑150 (MQ=255) cgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGc > 1:208871‑M2/74‑150 (MQ=255) gtaacgaagttggatgcaaatgtcagatcgtgtgtgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGtt < 1:3426364‑M2/87‑1 (MQ=255) acgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGttttt < 1:1501098‑M2/90‑1 (MQ=255) cgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTc < 1:4196055‑M2/91‑1 (MQ=255) gttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCctct > 1:2899990‑M2/56‑150 (MQ=255) ttggatgcaaacgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTGTCTCGCAGTGCGCGTTTTTCCTCTg < 1:1138871‑M2/96‑1 (MQ=255) gtgggtataaatgtcagatcgtgtgcgccttttagggcgcggctgggaagagagCCTTATAGGCGTATTTGAAACACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTg < 1:2246438‑M2/96‑1 (MQ=255) gatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTgcgc < 1:54038‑M2/99‑1 (MQ=255) caaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAg > 1:3239168‑M2/48‑150 (MQ=255) caaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAg > 1:4211844‑M2/48‑150 (MQ=255) gtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTCTGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAg > 1:3994711‑M2/43‑150 (MQ=255) tcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCCCGCAGTGCGCGTTTTTCCTCTGCGCTGA‑GAAAGcc > 1:733892‑M2/42‑150 (MQ=255) gtgcgcctgttatggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAg < 1:4001608‑M2/118‑1 (MQ=255) tgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGa < 1:2140300‑M2/119‑1 (MQ=255) gcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGAc > 1:3059191‑M2/31‑150 (MQ=255) gTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTaa > 1:1446377/1‑150 (MQ=255) ggCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCtgt < 1:1053180/150‑1 (MQ=255) ggCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCtgt < 1:1300251/150‑1 (MQ=255) gcgcGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCtgtg > 1:2051081/1‑150 (MQ=255) gcgcGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCtgtg < 1:2130894/150‑1 (MQ=255) gcgcGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCtgtg < 1:1463658/150‑1 (MQ=255) cTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGc > 1:1396998/1‑150 (MQ=255) aaGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGTCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGAtt < 1:4081076/150‑1 (MQ=255) aaGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATACTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGAtt < 1:4033405/150‑1 (MQ=255) anagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTAGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGc > 1:4187920/1‑150 (MQ=255) tataGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCggg < 1:1502329/150‑1 (MQ=255) cgcATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAAcc > 1:3528163/1‑150 (MQ=255) ttGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCcagca < 1:2915087/150‑1 (MQ=255) gAAAAACCTACGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCagcagc > 1:3341754/1‑150 (MQ=255) aaaaCCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGAACATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTg > 1:3469266/1‑150 (MQ=255) aaaCCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTgg < 1:1906193/150‑1 (MQ=255) aaaCCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTgg < 1:1906195/150‑1 (MQ=255) ccTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGgcgc > 1:3661176/1‑150 (MQ=255) cTCCGGCTATGCCGGAGGATATTTATTTTTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTCTGCCTTGCGGAGTTGCTCGCGGGATAACCCAGCAGCTGGcgcg < 1:568238/150‑1 (MQ=255) cGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGGCGCGGCa < 1:4205706/150‑1 (MQ=255) cTATGCCGGAGGATATTTATTTGTTACTCCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCCGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGGCGCGGCAACg < 1:2276277/150‑1 (MQ=255) gCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGGCGCGGCAACGGtat < 1:4063026/150‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGACCATTAATCTGTGCCTGGCGGATTTGCTCGCGGGATAACCCAGCAGCTGGCGCGGCAACGGTAT > Xen14_21/1‑207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |