New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_108 2632 =90 (0.800)58 (0.150) 36/284 2.4 57.3% coding (438/747 nt) Xen14_04656 IS3 family transposase ISCfr6
?Xen14_144 = 1085 0 (0.000)intergenic (+15/–) Xen14_04760/– IS110 family transposase ISEc21/–

Only 100 of 148 total aligned reads displayed.

GTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_144/936‑1091
                                                                                                                                                     |                                                             
gTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGt                                                               <  1:4192559/150‑1 (MQ=255)
gTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGt                                                               >  1:35687/1‑150 (MQ=255)
gTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGt                                                               <  1:1752636/150‑1 (MQ=255)
gTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGt                                                               <  1:1752641/150‑1 (MQ=255)
gTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGt                                                               >  1:1860221/1‑150 (MQ=255)
 tCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTc                                                              >  1:3422980/1‑150 (MQ=255)
 tCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTc                                                              <  1:1204077/150‑1 (MQ=255)
 tCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTc                                                              >  1:2367920/1‑150 (MQ=255)
 tCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTc                                                              >  1:1876648/1‑150 (MQ=255)
 tCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCAATAACGGCTTGACTCTTAGAAGGGCGTc                                                              >  1:3732822/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATCCATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTCAGAAGGGCGTca                                                             >  1:1011715/1‑149 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:4109884/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             <  1:1414282/150‑1 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:1487111/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:1487112/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:3826666/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:78319/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:3152420/1‑150 (MQ=255)
  cGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCAAGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTcc                                                             >  1:4161617/1‑150 (MQ=255)
   gCCAGACGAGTAGCGGAAGGGCATAAAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCNACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCa                                                            >  1:3670249/1‑150 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGTGTCCAgg                                                          <  1:3375172/150‑1 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          <  1:806086/150‑1 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          <  1:701690/150‑1 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          >  1:2620556/1‑150 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          <  1:2316159/150‑1 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGACAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          >  1:1589806/1‑150 (MQ=255)
     cAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGACAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgg                                                          >  1:1589807/1‑150 (MQ=255)
      agccGAGCAGCGGACGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATCCATTACTGCGTAATCAAAACGGGCAGATCAACAGCATCCCGATAACGGCTTGACCCTTCGAAGGGCGTCCAggg                                                         >  1:2636233/4‑150 (MQ=25)
      aGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGACGCGCTCTATCTCACGCGAAGTTTATACATTACTGCGTCATCAAAACAGGCAAATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAggg                                                         >  1:4038779/1‑150 (MQ=25)
      aGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAggg                                                         >  1:3258646/1‑150 (MQ=255)
      aGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAggg                                                         >  1:4038780/1‑150 (MQ=255)
       gACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccaggga                                                        >  1:3787318‑M2/1‑143 (MQ=255)
        aCGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggta                                                       <  1:1499555/150‑3 (MQ=255)
         cGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtag                                                      <  1:1988259/150‑4 (MQ=255)
         cGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtag                                                      <  1:211249/150‑4 (MQ=255)
         cGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtag                                                      <  1:333280/150‑4 (MQ=255)
         cGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtag                                                      >  1:153823/1‑147 (MQ=255)
         cGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtag                                                      >  1:153824/1‑147 (MQ=255)
           aGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtc                                                    <  1:639950/150‑6 (MQ=255)
           aGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtc                                                    <  1:1355287/150‑6 (MQ=255)
           aGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtc                                                    <  1:3472761/150‑6 (MQ=255)
           aGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtc                                                    >  1:1771088/1‑145 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtggcca                                                   <  1:3113301/150‑7 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtca                                                   <  1:1218576/150‑7 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtca                                                   >  1:3554478/1‑144 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATCACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtca                                                   >  1:3523917/1‑144 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCCATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtca                                                   >  1:2311892/1‑144 (MQ=255)
            gTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCATGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtca                                                   >  1:1991093/1‑144 (MQ=255)
            gTAGCGGAAGGACATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagcca                                                   >  1:2231790‑M2/1‑138 (MQ=255)
             tAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcat                                                  <  1:578140/150‑8 (MQ=255)
             tAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcat                                                  <  1:3965341/150‑8 (MQ=255)
              aGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagt                                                 >  1:176986‑M2/1‑136 (MQ=255)
              aGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcatt                                                 >  1:1012364/1‑142 (MQ=255)
              aGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcatt                                                 >  1:4209294/1‑142 (MQ=255)
               gCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcatta                                                >  1:3752555/1‑141 (MQ=255)
               gCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcatta                                                >  1:1142167/1‑141 (MQ=255)
               gCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCATGACTCTTAGAAGGGCGTCCAgggtagtcatta                                                <  1:189709/150‑10 (MQ=255)
                cGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtat                                               <  1:3551321‑M2/150‑17 (MQ=255)
                cGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCCTCCAgggtagtcattat                                               >  1:292245/1‑140 (MQ=255)
                 ggAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtata                                              <  1:3279616‑M2/150‑18 (MQ=255)
                  gAAGGGCATACAAAGATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatac                                             >  1:2123822/1‑138 (MQ=25)
                  gAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatac                                             <  1:3145039/150‑13 (MQ=255)
                  gAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatac                                             <  1:403796/150‑13 (MQ=255)
                  gAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatac                                             <  1:2771153/150‑13 (MQ=255)
                    aGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacag                                           >  1:2402778‑M2/1‑130 (MQ=255)
                    aGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacag                                           >  1:3729249‑M2/1‑130 (MQ=255)
                    aGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatacga                                           <  1:2507538/150‑15 (MQ=255)
                     gggCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacagg                                          >  1:3469538‑M2/1‑129 (MQ=255)
                     gggCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatacgag                                          <  1:3040710/150‑16 (MQ=25)
                     gggCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatacgag                                          <  1:3072892/150‑16 (MQ=25)
                     gggCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattatacga                                           >  1:532571/1‑135 (MQ=255)
                        cATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcct                                       <  1:2503551‑M2/150‑25 (MQ=255)
                         aTACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGTGCGTccagggaagccagtata                                              >  1:3855463‑M2/1‑125 (MQ=255)
                         aTACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattata                                              <  1:972647/142‑12 (MQ=255)
                         aTACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAgggtagtcattata                                              <  1:972645/142‑12 (MQ=255)
                          tACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctga                                     <  1:1534679‑M2/150‑27 (MQ=255)
                          tACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctga                                     >  1:3562059‑M2/1‑124 (MQ=255)
                           aCAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaa                                    >  1:2865160‑M2/1‑123 (MQ=255)
                            cAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaa                                   <  1:2711150‑M2/150‑29 (MQ=255)
                              aaaaTGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaata                                 <  1:2262722‑M2/150‑31 (MQ=255)
                                 aTGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatca                              >  1:498276‑M2/1‑117 (MQ=255)
                                   ggAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaac                            >  1:1373884‑M2/1‑115 (MQ=255)
                                   ggAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaac                            >  1:1284250‑M2/1‑115 (MQ=255)
                                   ggAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaac                            >  1:1284248‑M2/1‑115 (MQ=255)
                                   ggAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaac                            >  1:1003748‑M2/1‑115 (MQ=255)
                                    gAAGCAATACGCTGCCTGAAGCGCTATATCTCCCGCGAAGTTTCTACATTACTGCGTAATCAACACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGAGCGTcaagggaagccagtatacaggcctgaaatatcacca                           <  1:496124‑M2/150‑37 (MQ=255)
                                    gAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaaca                           >  1:1724919‑M2/1‑114 (MQ=255)
                                        cAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaatt                       <  1:3007115‑M2/150‑41 (MQ=255)
                                              gCTGCCTGAAGCGCTATATCTCACGCGAAGTTTGTACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctgg                 <  1:869197‑M2/150‑47 (MQ=255)
                                                 gCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgt              <  1:948537‑M2/150‑50 (MQ=255)
                                                 gCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTAATGCGTAATCAAAACAGGCCGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaacatcaacaaattctctggcgt              <  1:4170377‑M2/150‑50 (MQ=255)
                                                      aaGCGCTGTATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacag         >  1:1737310‑M2/1‑96 (MQ=255)
                                                      aaGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttgcag         >  1:1405203‑M2/1‑96 (MQ=255)
                                                      aaGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacag         >  1:4249272‑M2/1‑96 (MQ=255)
                                                      aaGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacag         >  1:4101485‑M2/1‑96 (MQ=255)
                                                        gcgcTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctccggcgttacagaa       >  1:677289‑M2/1‑94 (MQ=255)
                                                          gcTATATCTCACGCGAAGTTTATACACTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacagaata     >  1:3744994‑M2/1‑92 (MQ=255)
                                                          gcTATAGCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacagaata     >  1:3330506‑M2/1‑92 (MQ=255)
                                                           cTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtataca                                            >  1:10998‑M2/1‑91 (MQ=255)
                                                             atatCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTccagggaagccagtatacaggcctgaaatatcaacaaattctctggcgttacagaataaag  >  1:3006677‑M2/1‑89 (MQ=255)
                                                                                                                                                     |                                                             
GTCGCCAGACGAGTAGCGGAAGGGCATACAAAAATGGAAGCAATACGCTGCCTGAAGCGCTATATCTCACGCGAAGTTTATACATTACTGCGTAATCAAAACAGGCAGATCAACAGCATCCCGATAACGGCTTGACTCTTAGAAGGGCGTCCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_144/936‑1091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.