| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_108 | 2632 = | 90 (0.800) | 58 (0.150) | 36/284 | 2.4 | 57.3% | coding (438/747 nt) | Xen14_04656 | IS3 family transposase ISCfr6 |
| ? | Xen14_144 | = 1085 | 0 (0.000) | intergenic (+15/–) | Xen14_04760/– | IS110 family transposase ISEc21/– | |||||
ATTTATTCTGCAACGCCAGAGAAGTTGTTGATATTTAAGGCCTGTATACTGGCTTCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_108/2692‑2632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACTCGTC < Xen14_144/1085‑943 cTTTATTCTGTAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATAT > 1:3006677/2‑150 TATTCTGTAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAGTGTATAAACTTCGCGTGAGATATAGC > 1:3744994/1‑150 TATTCTGTAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGCTATAGC > 1:3330506/1‑150 TATTCTGTAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGC < 1:1762561/150‑1 TTCTGTAACGCCGGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGC > 1:677289/1‑150 ctgtAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTT > 1:4101485/5‑150 ctgtAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTT > 1:4249272/5‑150 ctgtAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATACAGCGCTT > 1:1737310/5‑150 CTGCAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTT > 1:1405203/1‑150 tAACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTNGGAGTCAAGCCGTTATCGGGATGCTGTTGATCTNCCTGTTTTGATTACGCAGTAACGTACAAACTTCGCGTGAGATATAGCGCTTCAG < 1:3724122/149‑1 ACGCCAGAGAATTTGTTGATGTTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCGGCCTGTTTTGATTACGCATTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGC < 1:4170377/150‑1 ACGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGC < 1:948537/150‑1 CGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCA < 1:3029609/150‑1 CGCCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCA > 1:203359/1‑150 CCAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTACAAACTTCGCGTGAGATATAGCGCTTCAGGCAGC < 1:869197/150‑1 CAGAGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCG < 1:247276/150‑1 AGAATTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTAT > 1:1744100/1‑150 aatTTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTG < 1:3007115/147‑1 TTGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTT < 1:3160830/150‑1 tggTGATATTTCAGGCCTGTATACTGGCTTCCCTTGACGCTCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTGTTGATTACGCAGTAATGTAGAAACTTCGCGGGAGATATAGCGCTTCAGGCAGCGTATTGCTTC < 1:496124/147‑1 TGTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTC > 1:1724919/1‑150 GTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCC > 1:1284248/1‑150 GTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCC > 1:1373884/1‑150 GTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCC > 1:1284250/1‑150 GTTGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCC > 1:1003748/1‑150 TGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCAT > 1:498276/1‑150 TGATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCAT > 1:533058/1‑150 GATATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATT > 1:1019459/1‑150 TATTTCAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTT < 1:2262722/150‑1 tttcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTG < 1:2711150/146‑1 tttcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTG > 1:969625/5‑150 tttcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTG < 1:1622917/146‑1 ttcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGT > 1:2865160/4‑150 tcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTA < 1:1534679/148‑1 tcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTA < 1:1534682/148‑1 tcAGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTA > 1:3562059/3‑150 atGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATG < 1:2352473/148‑1 AGGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATG < 1:2503551/150‑1 GGCCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTACATTTTTGTATGC > 1:2638135/1‑150 CCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCC > 1:2264892/1‑150 CCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCC > 1:3469538/1‑150 CCTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCAGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCC > 1:1309105/1‑150 CTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCT > 1:3729249/1‑150 CTGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCT > 1:2402778/1‑150 TGTATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAG > 1:10998/1‑110 TATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCC < 1:3279616/150‑1 TATACTGGCTTCCCTGGACGCACTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTAT > 1:3855463/1‑142 atgCTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTAT > 1:4235636/4‑141 ATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCG < 1:4121643/150‑1 ATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCG < 1:3551321/150‑1 ATACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACCTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTAT > 1:648603/1‑141 ACTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCT > 1:176986/1‑150 CTGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTA > 1:829017/1‑150 TGGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGTCCTTCCGCTAC > 1:2231790/1‑150 GGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACT > 1:3497219/1‑150 GGCTTCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACT < 1:725511/150‑1 TCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACTCGTC > 1:2549516/1‑150 TCCCTGGACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACTCGTC > 1:3787318/1‑150 ATTTATTCTGCAACGCCAGAGAAGTTGTTGATATTTAAGGCCTGTATACTGGCTTCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_108/2692‑2632‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggACGCCCTTCTAAGAGTCAAGCCGTTATCGGGATGCTGTTGATCTGCCTGTTTTGATTACGCAGTAATGTATAAACTTCGCGTGAGATATAGCGCTTCAGGCAGCGTATTGCTTCCATTTTTGTATGCCCTTCCGCTACTCGTC < Xen14_144/1085‑943 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |