BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_12	= 188	107 (1.290)	54 (0.410)	28/296	2.5	33.5%	intergenic (–/+140)	–/Xen14_01540	–/hypothetical protein
*	?	Xen14_68	16331 =	NA (NA)	54 (0.410)	28/296	2.5	33.5%	intergenic (+51/–)	rph/–	Ribonuclease PH/–

Only 100 of 517 total aligned reads displayed.

AACTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGCCA  >  Xen14_12/38‑327

  cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                            <  1:2230682/150‑1 (MQ=255)

  cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGc                                                                                                                                            >  1:266522‑M2/1‑149 (MQ=255)

  cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGc                                                                                                                                            <  1:237332‑M2/150‑2 (MQ=255)

  cTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTAAATGGCGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAgg                                                                                                                                            >  1:2271418/1‑150 (MQ=255)

   tGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtc                                                                                                                                           >  1:1859047‑M1/1‑148 (MQ=255)

   tGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGCGGGATGGCTGGTTCAGACTTCAGGAGATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGcc                                                                                                                                           >  1:3470432‑M2/1‑148 (MQ=255)

    ggCGAAACTTGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctg                                                                                                                                          >  1:3873239‑M2/1‑147 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccc                                                                                                                                          <  1:3554274‑M2/150‑4 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGagc                                                                                                                                          >  1:729510‑M1/1‑147 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcc                                                                                                                                          >  1:2769430/1‑149 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCa                                                                                                                                          >  1:2980649/1‑150 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCAGGTTGGGTAGTAATGTGGAATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTAACTGGTGATGAAGTCTCTTGATCAGGCGATCTGATCAAGAGACAGccc                                                                                                                                          <  1:3917457‑M2/150‑4 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCG‑CCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcag                                                                                                                                         <  1:1353769‑M1/150‑5 (MQ=255)

    ggCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCG‑CCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcag                                                                                                                                         >  1:3354477‑M1/1‑146 (MQ=255)

     gCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCACCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGggt                                                                                                                                         >  1:308495‑M1/1‑147 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGCGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGcccca                                                                                                                                        <  1:234067‑M2/150‑6 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGGGATCTGATCAAGAGACAGagcag                                                                                                                                        >  1:2931058‑M1/1‑145 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtc                                                                                                                                        <  1:366924‑M2/150‑6 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGcgaac                                                                                                                                        >  1:1459502‑M2/1‑145 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccgcc                                                                                                                                        <  1:586317‑M2/150‑6 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCAGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtc                                                                                                                                        <  1:1298448‑M2/150‑6 (MQ=255)

      cGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCG‑CCCGGTTGGTTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATTAAGAGACAGtcagca                                                                                                                                       <  1:3168277‑M1/150‑7 (MQ=255)

       gAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCG‑CCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcagcat                                                                                                                                      <  1:929198‑M1/150‑8 (MQ=255)

         aaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgc                                                                                                                                     >  1:2157401‑M2/1‑142 (MQ=255)

         aaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccgcccgg                                                                                                                                     >  1:1171105‑M2/1‑142 (MQ=255)

         aaCTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAAc                                                                                                                                     >  1:1383588/1‑150 (MQ=255)

           cTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctggcgcagg                                                                                                                                   >  1:2178602‑M2/1‑140 (MQ=255)

           cTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccccagagga                                                                                                                                   <  1:3145205‑M2/150‑11 (MQ=255)

           cTGGGGCGATGGCATGACAGCAAACGCACCGGTCG‑CTCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcagcatgagg                                                                                                                                  <  1:1702543‑M1/150‑12 (MQ=255)

           cTGGGGCGATGGCATGACAGCAAACACACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcctcgggag                                                                                                                                   <  1:1432797‑M1/150‑11 (MQ=255)

            tGGGGCGATGGCATGACAGCAAACGCACCGGTCNCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccag                                                                                                                                  >  1:1514971‑M2/1‑139 (MQ=255)

            tGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACTTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctggcgcaggg                                                                                                                                  <  1:4152006‑M2/150‑12 (MQ=255)

            tGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGATGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccaaaaggggcg                                                                                                                                 >  1:3642410‑M2/1‑138 (MQ=255)

            tGGGGCGATGGCATGACAGCAAACGCACCGGTCGCACCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATTAGGAGATCTGATCAAGAGACAGctggcgcaggg                                                                                                                                  <  1:2550631‑M2/150‑12 (MQ=255)

             ggggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGccgcacaggggg                                                                                                                                 <  1:1582624‑M2/150‑13 (MQ=255)

             ggggCGATGGCATGACAACAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAggttgcaggaagg                                                                                                                                 <  1:2109042/150‑12 (MQ=17)

              gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtaagagaagg                                                                                                                                >  1:976212‑M2/1‑137 (MQ=255)

              gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGccagtgagaggg                                                                                                                                >  1:133307/1‑139 (MQ=255)

              gggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTCCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCCGATCAAGAGACAggttgcaggaaggg                                                                                                                                >  1:2452659/1‑138 (MQ=17)

               tgCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCGTGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcgtgaagcggggg                                                                                                                               <  1:1626521/149‑13 (MQ=17)

               ggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGggtacagagagag                                                                                                                               <  1:2690459‑M1/150‑14 (MQ=255)

               ggCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcgtga                                                                                                                                       >  1:2800374/1‑138 (MQ=255)

                gCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGccagtgagagggat                                                                                                                              >  1:1887761/1‑137 (MQ=255)

                 cGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcgtgaagcgggggag                                                                                                                             <  1:1561408/150‑15 (MQ=255)

                  gATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGcgtgaagcgggggagt                                                                                                                            >  1:557011/1‑135 (MQ=17)

                   aTGGCATGACAGCAAACGCACCGGTCGCCCCGTTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                           <  1:2509622‑M1/150‑18 (MQ=255)

                   aTGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttt                                                                                                                           >  1:2863112‑M1/1‑133 (MQ=255)

                    tGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggact                                                                                                                          >  1:1025855‑M2/1‑131 (MQ=255)

                    tGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTCCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggact                                                                                                                          >  1:3254329‑M2/1‑131 (MQ=255)

                    tGGCACGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtaagagaaggagtttg                                                                                                                          >  1:2306393‑M2/1‑131 (MQ=255)

                       cATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaa                                                                                                                       >  1:712455‑M1/1‑129 (MQ=255)

                        aTGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGATGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGctct                                                                                                                      <  1:3215873/150‑1 (MQ=255)

                        aTGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgata                                                                                                                      <  1:3593146‑M2/150‑24 (MQ=255)

                          gACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataac                                                                                                                    <  1:2022198‑M2/150‑26 (MQ=255)

                            cAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactt                                                                                                                  <  1:1802520‑M2/150‑28 (MQ=255)

                              gCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgttctggcagggctgcgaattacaggt                                                                                                                <  1:521229‑M2/150‑30 (MQ=255)

                               cAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgttctggcagggctgcgaattacaggtc                                                                                                               >  1:2661049‑M2/1‑120 (MQ=255)

                                aaaCGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGagctaggctgggggttccggaaagctttcag                                                                                                              <  1:3187923‑M1/150‑32 (MQ=255)

                                  aCGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGANCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatc                                                                                                            >  1:3897813‑M2/1‑117 (MQ=255)

                                     cACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataaga                                                                                                         <  1:2968242‑M1/150‑36 (MQ=255)

                                         ggTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTAATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaat                                                                                                     <  1:1071659‑M2/150‑41 (MQ=255)

                                           tCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgc                                                                                                   >  1:1050376‑M2/1‑108 (MQ=255)

                                            cGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATAc                                                                                                  >  1:3542717/1‑150 (MQ=255)

                                            cGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTAATCAAGAGACAGagctaggctgggggttccggaaagctttcagctttgagccagt                                                                                                  <  1:3844735‑M1/150‑44 (MQ=255)

                                             gCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctggcgcag                                                                                                                                    <  1:2005510‑M2/115‑10 (MQ=255)

                                              cccgggTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGa                                                                                                >  1:1231992/5‑150 (MQ=255)

                                              ccccGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGagctaggctgggggttccggaaagctttcagctttgagccagtta                                                                                                <  1:3383173‑M1/150‑46 (MQ=255)

                                              ccccGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGagctaggctgggggttccggaaagctttcagctttgagccagtta                                                                                                >  1:494686‑M1/1‑105 (MQ=255)

                                                ccGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatcc                                                                                              >  1:3330313‑M2/1‑103 (MQ=255)

                                                ccGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttacca                                                                                              <  1:2827933‑M1/150‑47 (MQ=255)

                                                 cGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatcct                                                                                             <  1:426096‑M2/150‑49 (MQ=255)

                                                     tGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatccttgat                                                                                         >  1:3429710‑M2/1‑98 (MQ=255)

                                                     tGGGTAGTCATGTGGAATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatccttgnt                                                                                         >  1:4238112‑M2/1‑98 (MQ=255)

                                                        gTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatccttgatcac                                                                                      >  1:2573655‑M2/1‑95 (MQ=255)

                                                        gTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatccttgatcac                                                                                      >  1:252925‑M2/1‑95 (MQ=255)

                                                        gTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGctgtccgccagggcggactgataactttttatccggtaatgccatccttgatcac                                                                                      <  1:909315‑M2/150‑56 (MQ=255)

                                                           gTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgcccta                                                                                   <  1:1195564‑M1/150‑58 (MQ=255)

                                                           gTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCCGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgcccta                                                                                   <  1:4095902‑M1/150‑58 (MQ=255)

                                                           gTCATGGGGGATGGCTGGTTCAGACTTCAGGATATGGTTGGGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgcccta                                                                                   <  1:3308151‑M1/150‑58 (MQ=255)

                                                            tCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGagctaggctgggggttccggaaagctttcagctttgagccagttattaaaacccctttt                                                                                  <  1:76554‑M1/150‑60 (MQ=255)

                                                             cATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCgggg                                                                                 <  1:4116484/150‑1 (MQ=255)

                                                              aTGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGc                                                                                <  1:4049732/150‑1 (MQ=255)

                                                              aTGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGc                                                                                >  1:302247/1‑150 (MQ=255)

                                                                    gATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGgcatagccggaggtttttcaaatgcgcctataagactctcttaccagccgcgccctaacaggcgca                                                                          >  1:791005‑M1/1‑84 (MQ=255)

                                                                         cTGGTTCGGACTTCAGGATGTGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAgggg                                                                     <  1:4198425/150‑1 (MQ=255)

                                                                             ttCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGttag                                                                 >  1:193852/1‑147 (MQ=255)

                                                                                   cTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcctcgggaggggttttctgtgcacaataaaccgccagatgttttctggcggtttgtctcaaattaacgtcgtgtagccgct                                                           <  1:830582‑M1/150‑83 (MQ=255)

                                                                                      cAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCATGGGTCagtagt                                                             <  1:3955465/145‑1 (MQ=255)

                                                                                       aGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcctcgggaggggttttctgtgcacaataaaccgccagatgttttctggcggtttgtctcaaattaacgtcgtgtagccgctttca                                                       >  1:695054‑M1/1‑64 (MQ=255)

                                                                                         gATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGtcctcgggaggggttttctgtgcacaataaaccgccagatgttttctggcggtttgtctcaaattaacgtcgtgtagccgctttcatc                                                     >  1:3710560‑M1/1‑62 (MQ=255)

                                                                                           tatGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACgg                                                   <  1:626440/150‑1 (MQ=255)

                                                                                              ggTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCa                                                <  1:869321/150‑1 (MQ=255)

                                                                                                     ggTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGc                                         <  1:449295/150‑1 (MQ=255)

                                                                                                      gTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTAAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCg                                        >  1:2898031/1‑150 (MQ=255)

                                                                                                      gTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCCGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCGCCTCAGCg                                        >  1:3812668/1‑150 (MQ=255)

                                                                                                        tACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGaa                                      >  1:1111645/1‑150 (MQ=255)

                                                                                                           cTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACgg                                   >  1:2418679/1‑150 (MQ=255)

                                                                                                                         tctTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGc                     >  1:1735372/1‑150 (MQ=255)

                                                                                                                                  ggAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGaaaa            <  1:1470169/150‑1 (MQ=255)

                                                                                                                                        cTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACAATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCa      >  1:2748004/1‑150 (MQ=255)

AACTGGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGGCATAAACAGGGGCATCAGCTCTGAACCGGGCCTGAACAATACGATCCCCATACGCGGGGCAATTTCAGGGGTCAGTAGTGCTCTCACGGTCACCTCAGCGAACGGTATTGCATGAACGCAGAAGAAAAAATTCAGCCA  >  Xen14_12/38‑327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.