BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_1	= 242479	1286 (17.050)	344 (4.230)	102/286	0.0	21.7%	coding (67/375 nt)	Xen14_00217	IS3 family transposase ISLad1
*	?	Xen14_186	394 =	NA (NA)	344 (4.230)	102/286	0.0	21.7%	intergenic (‑103/–)	Xen14_04784/–	IS3 family transposase ISCfr6/–

Only 100 of 1646 total aligned reads displayed.

CACCACCGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_1/242330‑242556

caccacCGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCCGAACTGCCTGCTCGTATAATGACTACCCTg                                                                                              >  1:911919/1‑150 (MQ=255)

 accaccGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGa                                                                                             >  1:1076623/1‑150 (MQ=255)

       ggCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCtg                                                                                       >  1:2228498/1‑150 (MQ=255)

        gCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCtgt                                                                                      >  1:2844725/1‑150 (MQ=255)

        gCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCACATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCtgt                                                                                      <  1:701278/150‑1 (MQ=255)

           tCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGa                                                                                   <  1:654217/150‑1 (MQ=255)

             cATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaa                                                                                 >  1:481120‑M1/1‑137 (MQ=255)

             cATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAAc                                                                                 <  1:2618323/150‑1 (MQ=255)

             cATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAAc                                                                                 >  1:1997078/1‑150 (MQ=255)

             cATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAAc                                                                                 >  1:312179/1‑150 (MQ=255)

              aTTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACa                                                                                >  1:1437877/1‑150 (MQ=255)

              aTTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACa                                                                                >  1:3942367/1‑150 (MQ=255)

              aTTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACa                                                                                <  1:3301602/150‑1 (MQ=255)

              aTTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGCTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGaata                                                                                >  1:278500/1‑148 (MQ=255)

                tCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagag                                                                              <  1:2656284‑M1/150‑17 (MQ=255)

                tCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagag                                                                              <  1:3559599‑M1/150‑17 (MQ=255)

                  gTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCAc                                                                            >  1:2316357/1‑150 (MQ=255)

                     cttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaag                                                                         <  1:3054072‑M1/150‑22 (MQ=255)

                     cttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaag                                                                         <  1:623918‑M1/150‑22 (MQ=255)

                     cttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCAcccc                                                                         >  1:1400251/1‑150 (MQ=255)

                     cttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCAcccc                                                                         >  1:239311/1‑150 (MQ=255)

                     cttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCAAAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCAaccc                                                                         >  1:3154149/1‑150 (MQ=255)

                      ttcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCccg                                                                        >  1:4054365/1‑150 (MQ=255)

                       tcAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCccgc                                                                       >  1:2031868/1‑150 (MQ=255)

                       tcAGACTCCTGAAGAAGCGTTCCAGTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagcc                                                                       <  1:2825427‑M1/150‑24 (MQ=255)

                         aGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCccgccg                                                                     <  1:511080/150‑1 (MQ=255)

                           aCTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCggg                                                                   <  1:3872877/150‑1 (MQ=255)

                            cTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACACCGCAGGGt                                                                  >  1:4167220/1‑150 (MQ=255)

                               cTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgg                                                               >  1:1159292‑M1/1‑119 (MQ=255)

                                tGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTAc                                                              <  1:1771511/150‑1 (MQ=255)

                                 gaagaaGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTAcc                                                             <  1:1001295/150‑1 (MQ=255)

                                 gaagaaGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTAcc                                                             <  1:2506784/150‑1 (MQ=255)

                                    gaagCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACg                                                          >  1:3800357/1‑150 (MQ=255)

                                    gaagCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACg                                                          <  1:3239361/150‑1 (MQ=255)

                                      agCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACggg                                                        >  1:1542012/1‑150 (MQ=255)

                                      agCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACggg                                                        <  1:3191622/150‑1 (MQ=255)

                                       gCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGt                                                       >  1:2986766/1‑150 (MQ=255)

                                         gTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttg                                                     >  1:290086‑M1/1‑109 (MQ=255)

                                          ttCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTc                                                    <  1:1703147/150‑1 (MQ=255)

                                           tCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgat                                                   >  1:4012547‑M1/1‑107 (MQ=255)

                                           tCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTcc                                                   <  1:215096/150‑1 (MQ=255)

                                           tCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTcc                                                   <  1:2454357/150‑1 (MQ=255)

                                           tCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTcc                                                   <  1:3753321/150‑1 (MQ=255)

                                            ccATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTccc                                                  >  1:3495502/1‑150 (MQ=255)

                                            ccATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCGCATACTATGCGTGAGCTGGTATCGCCACAATGACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGGGGAACATCACCCCGCCGGGTTTACCACGGGTTTccc                                                  <  1:2581729/150‑1 (MQ=38)

                                             cATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCa                                                 >  1:1281404/1‑150 (MQ=255)

                                               ttGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATg                                               <  1:2076270/150‑1 (MQ=255)

                                                tgtgctgTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagattcaagccgttatcgggatgctgttgatctgcc                                              <  1:3691145‑M1/147‑49 (MQ=255)

                                                 tggCTGTTCTCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATTTGGTATCGCCACAATAACTGCCGGAAATGCCTGCTCGTCTAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGGTTCCCCCGGGTTTGCCATGct                                             >  1:3973886/2‑149 (MQ=255)

                                                 gggCTGTTATCCCAGCAGTTTCCGCGCCGGCTGATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCNTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGcc                                             >  1:3721842/1‑150 (MQ=255)

                                                  ggCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCa                                            >  1:84144/1‑150 (MQ=255)

                                                  ggCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTACTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctg                                            >  1:1187585‑M1/1‑100 (MQ=255)

                                                    cTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGNCNGGTTTACCACGGGTTTCCCATGCCAtt                                          >  1:3852256/1‑150 (MQ=255)

                                                    cTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCAtt                                          >  1:4200296/1‑150 (MQ=255)

                                                         aTCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgat                                     <  1:341598‑M1/150‑58 (MQ=255)

                                                            ccAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACggg                                                        >  1:1374947/1‑128 (MQ=255)

                                                            ccAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAgcgc                                  <  1:2352482/150‑1 (MQ=255)

                                                            ccAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAgcgc                                  >  1:3612623/1‑150 (MQ=255)

                                                            ccAGCAGTTTCCGCGCCGGCCCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattac                                  >  1:1730645‑M1/1‑90 (MQ=255)

                                                               gcagTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCttt                               >  1:3264649/1‑150 (MQ=255)

                                                                 agTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCa                             >  1:2260615/1‑150 (MQ=255)

                                                                 agTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAACAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCa                             >  1:2730926/1‑150 (MQ=255)

                                                                  gTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATACCTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGCTCGCTGTGGACCATCACCCCGCCGGGTTTACCACGGTTTTCACATGCCATTTCCAGCGCTTTCAt                            >  1:3095245/1‑150 (MQ=37)

                                                                  gTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCAt                            <  1:2694132/150‑1 (MQ=255)

                                                                  gTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCAt                            <  1:1221131/150‑1 (MQ=255)

                                                                   tttCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattacgcagtaa                           >  1:3640695‑M1/1‑83 (MQ=255)

                                                                    ttCCGCGCCTGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATgg                          <  1:1321830/150‑1 (MQ=255)

                                                                    ttCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATgg                          >  1:4093027/1‑150 (MQ=255)

                                                                     tCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGt                         >  1:952606/1‑150 (MQ=255)

                                                                       cgcgCCGGTTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGa                       >  1:3437494/1‑150 (MQ=255)

                                                                       cgcgCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACGCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGa                       >  1:2949656/1‑150 (MQ=255)

                                                                        gcgcCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattacgcagtaatgtat                      <  1:1029286‑M1/150‑73 (MQ=255)

                                                                        gcgcCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAg                      <  1:3336383/150‑1 (MQ=255)

                                                                        gcgcCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAg                      <  1:1912053/150‑1 (MQ=255)

                                                                          gcCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGcc                    <  1:243174/150‑1 (MQ=255)

                                                                             ggCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattacgcagtaatgtataaact                 <  1:59421‑M1/150‑78 (MQ=255)

                                                                             ggCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGGACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGc                 >  1:2113809/1‑150 (MQ=255)

                                                                             ggCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGCAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGCGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGc                 >  1:728936/1‑150 (MQ=255)

                                                                               cTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctg               >  1:2557765/1‑148 (MQ=255)

                                                                               cTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctg               <  1:2188069/150‑3 (MQ=255)

                                                                               cTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctg               >  1:352308/1‑148 (MQ=255)

                                                                               cTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCAGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctg               >  1:4130975/1‑148 (MQ=255)

                                                                                tCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattacgcagtaatgtataaacttcg              <  1:1593171‑M1/150‑81 (MQ=255)

                                                                                tCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCGTGGTGAGCCTGctgt              <  1:4257786/150‑4 (MQ=255)

                                                                                 cATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtc             <  1:2060617/150‑5 (MQ=255)

                                                                                  aTACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtcc            <  1:679240/150‑6 (MQ=255)

                                                                                   tACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGgacgcccttctaagagtcaagccgttatcgggatgctgttgatctgcctgttttgattacgcagtaatgtataaacttcgcgt           <  1:1642786‑M1/150‑84 (MQ=255)

                                                                                   tACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccg           <  1:1849165/150‑7 (MQ=255)

                                                                                     ctctGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggc         >  1:1958638/1‑142 (MQ=255)

                                                                                     ctctGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggc         <  1:1495502/150‑9 (MQ=255)

                                                                                      tctGCGTGATCTGGTATCGTCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGCTTCCCATGCCACTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcg        <  1:3896811/150‑10 (MQ=21)

                                                                                       ctGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcga       <  1:1810239/150‑11 (MQ=255)

                                                                                        tGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcgag      <  1:78259/150‑12 (MQ=255)

                                                                                         gCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggc         <  1:872112/146‑9 (MQ=255)

                                                                                          cGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcgagaa    <  1:1877419/150‑14 (MQ=255)

                                                                                           gTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcgagaac   <  1:2282595/150‑15 (MQ=255)

                                                                                            tGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcgagaacg  >  1:54725/1‑135 (MQ=18)

                                                                                            tGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccggcgagaacg  <  1:3378116/150‑16 (MQ=18)

                                                                                            tGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCAAGCGCGTTCATGGTGAGCCTGctgtccggcgagaacg  >  1:1110272/1‑135 (MQ=18)

                                                                                                               tAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGctgtccgg          >  1:302053/1‑116 (MQ=255)

CACCACCGGCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCGCGCCGGCTCATACTCTGCGTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTCGTATAATGACTACCCTGATCGCTGTGGAACATCACCCCGCCGGGTTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_1/242330‑242556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.