New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_121 1 =0 (0.000)62 (0.140) 43/236 0.9 100% intergenic (–/+117) –/Xen14_04715 –/hypothetical protein
?Xen14_184 = 443 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 992 total aligned reads displayed.

GCTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_184/294‑473
                                                                                                                                                     |                                                                                                                                            
gCTACGCTTGTGTCTGTAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAg                                                                                                                                              >  1:3640669/1‑150 (MQ=255)
gCTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGATGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAg                                                                                                                                              <  1:3391590/150‑1 (MQ=255)
gCTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGTCAGGTAATGATTTACAGCGGCAAg                                                                                                                                              >  1:45865/1‑150 (MQ=255)
 gacaacccatgtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGt                                                                                                                                             <  1:711263/141‑1 (MQ=255)
 cTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTT‑GCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGtt                                                                                                                                            <  1:2548941/150‑1 (MQ=255)
 cTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAAATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGt                                                                                                                                             <  1:3004657/150‑1 (MQ=255)
  tACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTT‑GCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGttt                                                                                                                                           <  1:658141/150‑1 (MQ=255)
   aCGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGttt                                                                                                                                           <  1:3021139/150‑1 (MQ=255)
     gCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTa                                                                                                                                         >  1:24550/1‑150 (MQ=255)
      cTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTAc                                                                                                                                        >  1:3815445/1‑150 (MQ=255)
      cTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTAc                                                                                                                                        >  1:608883/1‑150 (MQ=255)
      cTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTAc                                                                                                                                        <  1:1495054/150‑1 (MQ=255)
         gtgtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTc                                                                                                                                     >  1:1877257/1‑150 (MQ=255)
          tgtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCa                                                                                                                                    >  1:369628/1‑150 (MQ=255)
          tgtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCa                                                                                                                                    <  1:3433512/150‑1 (MQ=255)
           gtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCaa                                                                                                                                   >  1:75674/1‑150 (MQ=255)
           gtCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAAAGTTTTGCCGTAGAAATGATGCCTGCATAACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCaa                                                                                                                                   >  1:2261603/1‑150 (MQ=255)
            tCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGACTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCaaa                                                                                                                                  >  1:296215/1‑150 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 >  1:2081667/1‑150 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 >  1:813826/1‑150 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 >  1:4151101/1‑150 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 >  1:2052427/1‑150 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 <  1:1634255/150‑1 (MQ=255)
             cTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGCCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaat                                                                                                                                 <  1:4279805/150‑1 (MQ=255)
              tGCAATCCAGTGCCCGAGGATCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaatg                                                                                                                                <  1:2010873/150‑1 (MQ=255)
                  aTCCAGTGCCCGAGGACCGTGAAGAAGAAAGAGAGTAATCCAGTGTGAGAGGCTGATGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaatgaatg                                                                                                                            <  1:2149023/150‑1 (MQ=255)
                  aTCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaatgaatg                                                                                                                            <  1:1669881/150‑1 (MQ=255)
                  aNCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAaatgaatg                                                                                                                            >  1:1545703/1‑150 (MQ=255)
                      aGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTc                                                                                                                        <  1:4061671/150‑1 (MQ=255)
                       gTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAGTGAATGTTTCa                                                                                                                       <  1:1962174/150‑1 (MQ=255)
                        tGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCAt                                                                                                                      <  1:526583/150‑1 (MQ=255)
                           ccGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATaaa                                                                                                                   <  1:1711437/150‑1 (MQ=255)
                             gAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACt                                                                                                                 <  1:1423169/150‑1 (MQ=255)
                             gAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACt                                                                                                                 <  1:2370128/150‑1 (MQ=255)
                                gACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGATCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGta                                                                                                              <  1:2684827‑M1/150‑3 (MQ=255)
                                gACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGACTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGta                                                                                                              <  1:1142623‑M1/150‑3 (MQ=255)
                                 aCCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAATAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtac                                                                                                             >  1:3403506‑M1/1‑147 (MQ=255)
                                   cGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcacct                                                                                                           <  1:2387308‑M1/150‑6 (MQ=255)
                                     tGAAGAAGAAAAAGATTAATCCAGTGTGAGAGACTGGTGTGAGGAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttc                                                                                                         <  1:1303705‑M1/150‑8 (MQ=255)
                                      gaagaagaaAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttca                                                                                                        >  1:109333‑M1/1‑142 (MQ=255)
                                        agaagaaAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcaga                                                                                                      >  1:3097879‑M1/1‑140 (MQ=255)
                                            gaaAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtc                                                                                                  >  1:306469‑M1/1‑136 (MQ=255)
                                             aaaaaGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtca                                                                                                 >  1:3313794‑M1/1‑135 (MQ=255)
                                                aaGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagat                                                                                              <  1:1590719‑M1/150‑19 (MQ=255)
                                                  gATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagatta                                                                                            <  1:2331584‑M1/150‑21 (MQ=255)
                                                  gATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagatta                                                                                            <  1:2806587‑M1/150‑21 (MQ=255)
                                                    ttAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatg                                                                                          <  1:2204661‑M1/150‑23 (MQ=255)
                                                    tnAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatg                                                                                          >  1:4356594‑M1/1‑128 (MQ=255)
                                                     tAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgt                                                                                         <  1:1332423‑M1/150‑24 (MQ=255)
                                                      aaTCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtc                                                                                        >  1:2594429‑M1/1‑126 (MQ=255)
                                                       aTCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtcc                                                                                       >  1:1378457‑M1/1‑125 (MQ=255)
                                                       aTCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtcc                                                                                       >  1:3304234‑M1/1‑125 (MQ=255)
                                                          cAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaac                                                                                    <  1:2850138‑M1/150‑29 (MQ=255)
                                                           aGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaaca                                                                                   >  1:350061‑M1/1‑121 (MQ=255)
                                                           aGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaaca                                                                                   >  1:3360764‑M1/1‑121 (MQ=255)
                                                            gtgtGAGAGGCTGGTGTGAGAAAGTTGCAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcag                                                                                                >  1:3979595‑M1/1‑120 (MQ=255)
                                                               tgAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttg                                                                               <  1:2500269‑M1/150‑34 (MQ=255)
                                                                 agagGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggg                                                                             >  1:678331‑M1/1‑115 (MQ=255)
                                                                 agagGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggg                                                                             <  1:3221610‑M1/150‑36 (MQ=255)
                                                                  gagGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttgggg                                                                            >  1:1776443‑M1/1‑114 (MQ=255)
                                                                   agGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggt                                                                           <  1:477743‑M1/150‑38 (MQ=255)
                                                                    ggCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtg                                                                          >  1:102060‑M1/1‑112 (MQ=255)
                                                                       tGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcag                                                                       <  1:192956‑M1/150‑42 (MQ=255)
                                                                        ggTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttgg                                                                              <  1:2921389‑M1/142‑35 (MQ=255)
                                                                         gtgtGAGAAAGTCGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagtt                                                                     >  1:3918266‑M1/1‑107 (MQ=255)
                                                                            tgAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGttttacttcaaatgaatgtttcataaactgtaccttcagatgtcagattatgtccaacatttggggtgcagttcag                                                                  <  1:1000991‑M2/150‑77 (MQ=255)
                                                                            tgAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcac                                                                  <  1:572712‑M1/150‑47 (MQ=255)
                                                                               gaAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcac                                                               >  1:3157484‑M1/1‑101 (MQ=255)
                                                                                aaaGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcagccag                                                              <  1:1453200‑M1/150‑51 (MQ=255)
                                                                                   gTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatg                                                                                                    >  1:2880444‑M1/1‑97 (MQ=255)
                                                                                   gTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTCTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatat                                                           >  1:3184598‑M1/1‑97 (MQ=255)
                                                                                    ttGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatgg                                                                >  1:1740608‑M1/1‑96 (MQ=255)
                                                                                     tGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcg                                                         >  1:3120424‑M1/1‑95 (MQ=255)
                                                                                     tGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgta                                                         >  1:4203132‑M1/1‑95 (MQ=255)
                                                                                      gAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgt                                                        >  1:918231‑M1/1‑94 (MQ=255)
                                                                                         agagTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAGTGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcagccagcgtcgcatc                                                     <  1:1805339‑M1/150‑60 (MQ=255)
                                                                                           agTTTTGCCGTAGAAATGATGCCTGTATGACCGGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgtatccggc                                                   <  1:2719680‑M1/150‑62 (MQ=255)
                                                                                             ttttGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAACCTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcagccagcgtcgcatccgac                                                 >  1:633931‑M1/1‑87 (MQ=255)
                                                                                                  ccGTAGAAATGATGCCTGCATGACCAGCTAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgcatccggcagctggc                                            <  1:2303408‑M1/150‑69 (MQ=255)
                                                                                                  ccGTAGAAACGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttgg                                            <  1:734957‑M1/150‑69 (MQ=255)
                                                                                                   cGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccaca                                                              >  1:3875560‑M1/1‑81 (MQ=255)
                                                                                                    gTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGttttacttcaaatgaatgtttcataaactgtaccttcagatgtcagattatgtccaacatttggggtgcagttcagctagcgtcgcatcaggcattgtgc                                          <  1:897858‑M2/150‑101 (MQ=255)
                                                                                                     tAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtag                                         <  1:1055899‑M1/150‑72 (MQ=255)
                                                                                                      aGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTGCAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtaga                                        <  1:1184764‑M1/150‑73 (MQ=255)
                                                                                                      aGAAATGATGCCTGCATGACCAGCCAAGTAATTATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgcatccggcagctggcgcac                                        <  1:3280639‑M1/150‑73 (MQ=255)
                                                                                                         aaTGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatggcgcatcttatccggcctacgtgtgttg                                     <  1:1227698‑M1/150‑76 (MQ=255)
                                                                                                               gCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcancttcagatgtcagattatgtccaacatttggggtgcagttcagccagcgtcgcatccgacattttgggacagtgcagg                               <  1:3754939‑M1/150‑82 (MQ=255)
                                                                                                                 cTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatggcgcatcttatccggcctacgtgtgttgagataatg                             <  1:1983154‑M1/150‑84 (MQ=255)
                                                                                                                  tGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtagagataatcagttc                            >  1:787995‑M1/1‑66 (MQ=255)
                                                                                                                    cATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgcatccggcagctggcgcacaatgcctgatgcga                          <  1:93425‑M1/150‑87 (MQ=255)
                                                                                                                       gACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtagagataatcagttcatcgc                       <  1:3603738‑M1/150‑90 (MQ=255)
                                                                                                                         ccagccagGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtagagataatcagttcatcgcga                     <  1:2784964‑M1/150‑92 (MQ=255)
                                                                                                                              cagGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatggcgcatcttatccggcctacgtgtgttgagataatgtgtaggcacgata                >  1:865804‑M1/1‑54 (MQ=255)
                                                                                                                                  tAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgcatccggcagctggcgcacaatgcctgatgcgacgcttgacgcgtct            <  1:123989‑M1/150‑101 (MQ=255)
                                                                                                                                  tAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgtcagattatgtccaacatttggggtgcagttcagccagcgtcgcatccgacatttttgggacagtgcaggatgcgacataaacgtatt            >  1:4181887‑M1/1‑50 (MQ=255)
                                                                                                                                    aTGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcatcacgccgcatccggcagctggcgcacaatgcctgatgcgacgcttgacgcgtctta          <  1:2751465‑M1/150‑103 (MQ=255)
                                                                                                                                       aTTTACAGCGGCAAGttttacttcaaatgaatgtttcataaactgtaccttcagatgtcagattatgtccaacatttggggtgcagttcagctagcgtcgcatcaggcattgtgctccattgacggatgcgtttaatggcggtgtccatg       >  1:372824‑M2/1‑15 (MQ=255)
                                                                                                                                         ttACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGtaccttcagatgtcagattatgtccaacatttggggtgcagttcaccacatatcgtatccggctttggtagagataatcagttcatcgcgataagcggcaaaatcct     >  1:3551984‑M1/1‑43 (MQ=255)
                                                                                                                                           aCAGCGGCAAGttttacttcaaatgaatgtttcataaactgtaccttcagatgtcagattatgtccaacatttggggtgcagttcagctagcgtcgcatcaggcattgtgctccattgacggatgcgtttaatggcggtgtccatgtccg   <  1:1281368‑M2/150‑140 (MQ=255)
                                                                                                                                            cAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTGcaccttcagatgttagattatgtccaacatttgggtgcagttcagccagcgtcgcatccgacattttgggacagtgcaggatgcgacataaacgtattatgtgatcaaca  >  1:4104750‑M1/1‑40 (MQ=255)
                                                                                                                                                     |                                                                                                                                            
GCTACGCTTGTGTCTGCAATCCAGTGCCCGAGGACCGTGAAGAAGAAAAAGATTAATCCAGTGTGAGAGGCTGGTGTGAGAAAGTTGAAAGAGTTTTGCCGTAGAAATGATGCCTGCATGACCAGCCAGGTAATGATTTACAGCGGCAAGTTTTACTTCAAATGAATGTTTCATAAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_184/294‑473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.