| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_121 | 1 = | 0 (0.000) | 62 (0.140) | 43/236 | 0.9 | 100% | intergenic (–/+117) | –/Xen14_04715 | –/hypothetical protein |
| ? | Xen14_184 | = 443 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTC > Xen14_121/1‑149 | tgagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg < 1:1000991‑M1/76‑1 (MQ=255)tgagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg > 1:2756048‑M1/75‑150 (MQ=255)tgagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg < 1:2521795‑M1/76‑1 (MQ=255)tgagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg > 1:703963‑M1/75‑150 (MQ=255) agaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTATCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCt < 1:3007070‑M1/78‑1 (MQ=255) agaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAgca < 1:3335154‑M1/78‑2 (MQ=255) gaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCagcaa > 1:1203599‑M1/72‑148 (MQ=255) aaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAg < 1:2373143‑M1/80‑1 (MQ=255) aaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAg < 1:2373141‑M1/80‑1 (MQ=255) aagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGc > 1:931592‑M1/70‑150 (MQ=255) aagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAACGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTtcagcaagc < 1:1360982‑M1/81‑5 (MQ=255) agttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCg < 1:741230‑M1/82‑1 (MQ=255) agttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAAAGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCg > 1:449197‑M1/69‑150 (MQ=255) gttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGCCCAACATTTGGGGTGCAGTTCAGCAAGCGt < 1:460846‑M1/83‑1 (MQ=255) ttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAANGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTc < 1:3754648‑M1/84‑1 (MQ=255) tgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCg > 1:2362301‑M1/66‑150 (MQ=255) gaaagagttttgccgtagaaatgacgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGc > 1:1804639‑M1/65‑150 (MQ=255) gaaagagttttgccgtagaaatgacgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGc > 1:1804641‑M1/65‑150 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc < 1:648681‑M1/93‑1 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc > 1:3105085‑M1/58‑150 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc > 1:896696‑M1/58‑150 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc > 1:3069881‑M1/58‑150 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc > 1:896701‑M1/58‑150 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc > 1:1966230‑M1/58‑150 (MQ=255) tttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTCGc > 1:1390178‑M1/57‑142 (MQ=255) gccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTATCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtg > 1:187586‑M1/54‑150 (MQ=255) gccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGNGGTGCNGTTCAGCTAGCGTCGCATCAGGCATtg < 1:2714571‑M1/97‑1 (MQ=255) gccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtg < 1:2714572‑M1/97‑1 (MQ=255) gccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtg < 1:1202187‑M1/97‑1 (MQ=255) gccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtg < 1:4027204‑M1/97‑1 (MQ=255) gtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGc < 1:618168‑M1/100‑1 (MQ=255) gtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGc < 1:897858‑M1/100‑1 (MQ=255) agaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTc > 1:286025‑M1/49‑150 (MQ=255) gaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAACTAGCGTCGCATCAGGCATTGTGCTcc > 1:1746020‑M1/48‑150 (MQ=255) atgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCAtt < 1:3306944‑M1/106‑1 (MQ=255) atgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGAc > 1:3312913‑M1/42‑150 (MQ=255) tgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACg > 1:4081111‑M1/41‑150 (MQ=255) cctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCt < 1:4230918‑M1/78‑1 (MQ=255) ctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGAt < 1:3828963‑M1/113‑1 (MQ=255) catgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCg < 1:2441857‑M1/116‑1 (MQ=255) catgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCg < 1:2441855‑M1/116‑1 (MQ=255) catgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATATCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCg > 1:2846240‑M1/35‑150 (MQ=255) atgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGt < 1:2373248‑M1/117‑1 (MQ=255) tgaccaaccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGtt > 1:2784098‑M1/33‑150 (MQ=255) accagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTa > 1:2432979‑M1/31‑150 (MQ=255) accagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTa < 1:1973689‑M1/120‑1 (MQ=255) gccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATgg < 1:2758417‑M1/124‑1 (MQ=255) caggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCg < 1:2905672‑M1/126‑1 (MQ=255) caggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCg > 1:2757621‑M1/25‑150 (MQ=255) aggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCgg > 1:667150‑M1/24‑150 (MQ=255) atttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATg > 1:372824‑M1/16‑150 (MQ=255) atttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATg > 1:1093715‑M1/16‑150 (MQ=255) tttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGt < 1:2525053‑M1/136‑1 (MQ=255) tttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTCGGGTGCAGTTCATCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGt < 1:3136031‑M1/136‑1 (MQ=255) ttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTc > 1:3851727‑M1/14‑150 (MQ=255) acagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCcg < 1:1281370‑M1/139‑1 (MQ=255) acagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCcg < 1:1281368‑M1/139‑1 (MQ=255) gcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCAGCgg > 1:740692‑M1/9‑150 (MQ=255) gcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCt > 1:1829290‑M1/6‑150 (MQ=255) agTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCtttt > 1:2048586‑M1/3‑150 (MQ=255) gTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTc > 1:1835695‑M1/2‑150 (MQ=255) gTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTc < 1:633185‑M1/149‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTC > Xen14_121/1‑149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |