| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_21 | = 75 | NA (NA) | 20 (0.350) +AAATATGGCGGTGAGGGGGGGAT |
16/250 | 2.7 | 100% | intergenic (–/+2) | –/add | –/Adenosine deaminase |
| ? | Xen14_93 | = 7777 | 0 (0.000) | intergenic (‑302/–) | ghrA/– | Glyoxylate/hydroxypyruvate reductase A/– | |||||
AAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7634‑7777 | aaaaaaGTTTGTTGACCTCATGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccc > 1:871994‑M2/1‑144 (MQ=255)aaaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAa > 1:806371‑M2/1‑144 (MQ=255) aaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccc < 1:3382446‑M2/150‑8 (MQ=255) aCCTCAGGTCATGATTTCCCTAAATTGGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccata > 1:3500566‑M2/1‑130 (MQ=255) aCCTCAGGTCATGATTTCCCTAAATTGGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccata > 1:3500565‑M2/1‑130 (MQ=255) cAGGTCATGATTTCCCTAAATTAGCGCCCGCTTCAGCAAGACAGGGACGACAATTTTGTGAGGTGTTCGAGTGGCTGAGGGGGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGAGGGTTCGAatccctccctcaccgccatattta > 1:1465655‑M2/1‑126 (MQ=255) ggTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaa < 1:2279712‑M2/150‑27 (MQ=255) ttcATGATTCCCCGAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaat > 1:2214466‑M2/2‑123 (MQ=255) tCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaata > 1:774621‑M2/1‑122 (MQ=255) tCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaata > 1:774620‑M2/1‑122 (MQ=255) aTGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaa > 1:2764262‑M2/1‑120 (MQ=255) aTGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaa > 1:3550527‑M2/1‑120 (MQ=255) aaaTTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGCAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggc > 1:3374080‑M2/1‑109 (MQ=255) cgcCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCATGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccacccctaaccgccatatttaaagacatatcctccggcatagccg < 1:3193568‑M2/150‑49 (MQ=255) gTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccacctcaccgccatatttaactaaatatcctccggcatagccggaggt < 1:4151819‑M2/150‑54 (MQ=255) gCAATACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttca > 1:2503127‑M2/1‑91 (MQ=255) aCAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgc < 1:3034363‑M2/150‑65 (MQ=255) aGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgc > 1:1807810‑M2/1‑84 (MQ=255) ggAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttca > 1:116787‑M2/1‑83 (MQ=255) aTTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggct < 1:1776765‑M2/150‑77 (MQ=255) tttGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctc < 1:640628‑M2/150‑78 (MQ=255) aGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttacc > 1:3293847‑M2/1‑66 (MQ=255) ccGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgc < 1:768804‑M2/150‑91 (MQ=255) ccGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgc < 1:2815239‑M2/150‑91 (MQ=255) gTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgccctaacag < 1:3457459‑M2/106‑101 (MQ=255) | AAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7634‑7777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |