| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | = 629 | 0 (0.000) | 31 (0.050) | 24/210 | 1.4 | 100% | intergenic (‑111/–) | Xen14_04774/– | IS200/IS605 family transposase IS200C/– |
| ? | Xen14_62 | 44 = | 0 (0.000) | intergenic (–/+117) | –/Xen14_04136 | –/hypothetical protein | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCCGCG > Xen14_62/1‑191 | cattgggacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACaaga < 1:361340‑M2/36‑1 (MQ=255) ggacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGc < 1:1114337‑M2/41‑1 (MQ=255) gaccccctttttatttcttttttgacacttgcagttgccataccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTgcacaagaaggacg < 1:1282946‑M2/42‑5 (MQ=255) ccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGNGCACAAGAAGAGCTCGTAc < 1:3906808‑M2/47‑1 (MQ=255) ccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGNGCACAAGAAGAGCTCGTAc < 1:3906811‑M2/47‑1 (MQ=255) ccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagcttcccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTAc > 1:2159441‑M2/104‑150 (MQ=255) ccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagcttcccggaACCCCCAACCTAG‑ATGGGGGTTTTCTGTGCACAagaaga > 1:2159442‑M2/104‑142 (MQ=255) cttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTCG‑CTGGGGGTTTTCTGTGCACCAGAAGAGCCCGTAc > 1:2977698‑M2/103‑149 (MQ=255) tttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAGGAAGAGCTCGTACGaa > 1:1552664‑M2/101‑150 (MQ=255) tgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAagaaga < 1:2038609‑M2/39‑1 (MQ=255) tgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAGGAAGAGCTCGTACGAAAGTACGAGCttttt < 1:516119‑M2/64‑1 (MQ=255) ttgaagacgaaccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCg < 1:2240514‑M2/68‑1 (MQ=255) tgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGTGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGtat < 1:440193‑M2/71‑1 (MQ=255) gcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttctgaaACCCCCAGCCCAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGtata > 1:540395‑M2/79‑150 (MQ=255) gcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagatttctggaACCCCCAGCCTAG‑ATGGGGGTTTTCTGTGCACAAGGCGAGCTCGTACGAAAGTACGAGCTTTTTTTCGtata > 1:540397‑M2/79‑150 (MQ=255) cagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTatat > 1:557156‑M2/78‑150 (MQ=255) gccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAt > 1:2244840‑M2/73‑150 (MQ=255) ccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCACAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATa > 1:4130353‑M2/72‑150 (MQ=255) aaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCggggg < 1:79427‑M2/88‑1 (MQ=255) aaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCggggg < 1:79428‑M2/88‑1 (MQ=255) aaggtgtgttaacaaataaaaaggggttttaataactggcttaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAGGAGCTCGTACGAAAGTACGAGCTTTGTGTCGTATATTGCATACACCggggg < 1:79425‑M2/88‑1 (MQ=255) gtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGAt < 1:1395346‑M2/91‑1 (MQ=255) tgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGc < 1:948362‑M2/59‑1 (MQ=255) tgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATg > 1:2234225‑M2/59‑150 (MQ=255) gttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACC‑GGGGGATgag < 1:1767769‑M2/93‑1 (MQ=255) gttttaacaaatcaaaaggggttttaataactagctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATga > 1:2785714‑M2/58‑150 (MQ=255) tttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATgaga > 1:4106568‑M2/56‑150 (MQ=255) taacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAg < 1:4417872‑M2/97‑1 (MQ=255) aacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACAAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGc > 1:1457012‑M2/53‑150 (MQ=255) aatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCATAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACAGGGGGGATGAGAAGCCCCg > 1:3782092‑M2/49‑150 (MQ=255) atcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGa > 1:1673317‑M2/48‑150 (MQ=255) ggTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATa < 1:618220/150‑1 (MQ=255) ggTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATa < 1:618216/150‑1 (MQ=255) gTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATAc > 1:1448876/1‑150 (MQ=255) gTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATAc > 1:1588751/1‑150 (MQ=255) ttttAATCACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATAcc > 1:591917/1‑150 (MQ=255) aCTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCgggg > 1:3285353/1‑137 (MQ=255) tGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGc < 1:231904/150‑1 (MQ=255) cTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGAGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAAc > 1:3897498/1‑150 (MQ=255) aGCTGAAAGCTTCCCGGAACCCCCAGCCTAG‑CTGGGGTTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCGGGTTAATGCAACGGTTc < 1:2229414/150‑1 (MQ=255) gAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCActc > 1:1863550/1‑150 (MQ=255) gAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCActc < 1:1568412/150‑1 (MQ=255) ggAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTcgccgc < 1:54742/150‑1 (MQ=255) gAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCTCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCcgcg < 1:2032789/150‑1 (MQ=255) gAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCCTTTTCGCcgcg < 1:3816045/150‑1 (MQ=255) gAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTAGTATATTGCATACACCGGGGGGATGAGAAGCCTCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCcgcg < 1:314843/150‑1 (MQ=255) aaCCCCCAGC‑TAGGCTGGGGTTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTc < 1:194949/143‑1 (MQ=38) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCCGCG > Xen14_62/1‑191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |