| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_183 | = 477 | 0 (0.000) | 49 (0.470) +GGTGCCGATCA |
34/274 | 2.4 | 40.1% | intergenic (–/–) | –/– | –/– |
| ? | Xen14_75 | 12904 = | 158 (1.470) | intergenic (+578/–) | Xen14_04344/– | hypothetical protein/– | |||||
CGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_183/330‑477 | cGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAgg < 1:1729239‑M1/150‑3 (MQ=255) tCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtg < 1:4116710‑M1/150‑5 (MQ=255) cAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgc < 1:496851‑M1/150‑6 (MQ=255) aaCGGAGCACCGTATTGACGCTTATTTATTGGGGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggggcc < 1:3561354‑M1/150‑7 (MQ=255) aCGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccg > 1:3723535‑M1/1‑143 (MQ=255) cGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccga < 1:4057402‑M1/150‑9 (MQ=255) gAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGTAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGCTCAGACGGCAggtgccgatc < 1:4194209‑M1/150‑11 (MQ=255) gAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatc < 1:559066‑M1/150‑11 (MQ=255) gCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcag > 1:1080614‑M1/1‑138 (MQ=255) gCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcag < 1:1725316‑M1/150‑13 (MQ=255) cACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagc < 1:390349‑M1/150‑14 (MQ=255) aCCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcc > 1:4116253‑M1/1‑136 (MQ=255) aCCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcag < 1:480534‑M1/148‑13 (MQ=255) gTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgt < 1:1337762‑M1/150‑18 (MQ=255) aTTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtat > 1:1777156‑M1/1‑131 (MQ=255) aTTGACGCTTATTTATTGGTGAGTACTACGTTCCATGACAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgcc > 1:1593782‑M1/1‑131 (MQ=255) ttGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtata > 1:2157773‑M1/1‑130 (MQ=255) gACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCCTCCGGATCGATACCGTTCAGACGGCAggtg < 1:2794100‑M1/132‑5 (MQ=255) cTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtg < 1:684090‑M1/150‑27 (MQ=255) cTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtg > 1:838460‑M1/1‑124 (MQ=255) tatttattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGTAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgca > 1:3494143‑M1/1‑122 (MQ=255) tatttattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGACACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgca < 1:663673‑M1/150‑29 (MQ=255) atttattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcac > 1:2836609‑M1/1‑121 (MQ=255) ttattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcacca < 1:2199392‑M1/150‑32 (MQ=255) ttattGGTGAGGACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGACCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcacca < 1:3450851‑M1/150‑32 (MQ=255) tattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccac > 1:1229284‑M1/1‑118 (MQ=255) tattGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccac > 1:3893766‑M1/1‑118 (MQ=255) attGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacg > 1:4205031‑M1/1‑117 (MQ=255) ggTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctc > 1:2316210‑M1/1‑114 (MQ=255) ggTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctc > 1:2874048‑M1/1‑114 (MQ=255) gTGAGTACTATGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGAGCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcg < 1:3642783‑M1/150‑38 (MQ=255) gTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcg < 1:690470‑M1/150‑38 (MQ=255) gTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcg < 1:690474‑M1/150‑38 (MQ=255) gTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcg < 1:1821384‑M1/150‑38 (MQ=255) tGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgc > 1:3892817‑M1/1‑112 (MQ=255) gTACTACGTCCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgc > 1:814197‑M1/1‑109 (MQ=255) actacGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccg > 1:2200511‑M1/1‑107 (MQ=255) ctacGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgt > 1:2149699‑M1/1‑106 (MQ=255) cGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcc > 1:1478370‑M1/1‑103 (MQ=255) gTTCCATGGCAGTAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatc > 1:1507903‑M1/1‑102 (MQ=255) gTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatc < 1:3102218‑M1/150‑49 (MQ=255) gTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatc > 1:511942‑M1/1‑102 (MQ=255) ttCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcg > 1:207076‑M1/1‑101 (MQ=255) ccATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgct < 1:1055816‑M1/150‑52 (MQ=255) cATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgc > 1:4052184‑M1/1‑98 (MQ=255) tGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctacc < 1:2342639‑M1/150‑55 (MQ=255) aGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaac < 1:2122180‑M1/150‑62 (MQ=255) aGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaac < 1:3431214‑M1/150‑62 (MQ=255) gTTCATCAATCCGGTTGGANGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGATGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaaca > 1:3906880‑M1/1‑88 (MQ=255) gTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaaca > 1:2029922‑M1/1‑88 (MQ=255) ttCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacac > 1:3988104‑M1/1‑87 (MQ=255) ttCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacac < 1:1422746‑M1/150‑64 (MQ=255) tcatcaATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacacg > 1:403873‑M1/1‑86 (MQ=255) tcatcaATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacacg < 1:3371049‑M1/150‑65 (MQ=255) tcatcaATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCATTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacactcgccgccgtgatcgctaccgaaga > 1:3464507‑M1/1‑86 (MQ=255) catcaATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacacgt > 1:429139‑M1/1‑85 (MQ=255) atcaATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgctaccgaagaacacgta < 1:3921302‑M1/150‑67 (MQ=255) gCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatcgc > 1:1547251‑M1/1‑67 (MQ=255) ccGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAggtgccgatcagcccgtatagcagtgcaccacgctcgccgccgtgatc < 1:3446004‑M1/109‑49 (MQ=255) | CGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_183/330‑477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |