| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_183 | = 477 | 0 (0.000) | 49 (0.470) +GGTGCCGATCA |
34/274 | 2.4 | 40.1% | intergenic (–/–) | –/– | –/– |
| ? | Xen14_75 | 12904 = | 158 (1.470) | intergenic (+578/–) | Xen14_04344/– | hypothetical protein/– | |||||
CGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_183/330‑477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTA > Xen14_75/12904‑12958 ||||||||||| CGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGG < 1:1729239/150‑1 TCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTG < 1:4116710/150‑1 CAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGC < 1:496851/150‑1 AACGGAGCACCGTATTGACGCTTATTTATTGGGGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGGGCC < 1:3561354/150‑1 ACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCG > 1:3723535/1‑150 CGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGA < 1:4057402/150‑1 GAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGTAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGCTCAGACGGCAGGTGCCGATC < 1:4194209/150‑1 GAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATC < 1:559066/150‑1 GCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAG > 1:1080614/1‑150 GCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAG < 1:1725316/150‑1 CACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGC < 1:390349/150‑1 ACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCC > 1:4116253/1‑150 ACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAG < 1:480534/148‑1 GTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGT < 1:1337762/150‑1 ATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTAt > 1:1777156/1‑149 ATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGACAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCC > 1:1593782/1‑137 TTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTAta > 1:2157773/1‑148 GACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCCTCCGGATCGATACCGTTCAGACGGCAGGTG < 1:2794100/132‑1 CTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTG < 1:684090/150‑1 CTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTG > 1:838460/1‑150 TATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGTAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCA > 1:3494143/1‑150 TATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGACACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCA < 1:663673/150‑1 ATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCAC > 1:2836609/1‑150 TTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCA < 1:2199392/150‑1 TTATTGGTGAGGACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGACCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCA < 1:3450851/150‑1 TATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCAC > 1:1229284/1‑150 TATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCAC > 1:3893766/1‑150 ATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACG > 1:4205031/1‑150 GGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTC > 1:2316210/1‑150 GGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTC > 1:2874048/1‑150 GTGAGTACTATGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGAGCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCG < 1:3642783/150‑1 GTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCG < 1:690470/150‑1 GTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCG < 1:690474/150‑1 GTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCG < 1:1821384/150‑1 TGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGC > 1:3892817/1‑150 GTACTACGTCCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGC > 1:814197/1‑150 ACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCG > 1:2200511/1‑150 CTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGT > 1:2149699/1‑150 CGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCC > 1:1478370/1‑117 GTTCCATGGCAGTAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATC > 1:1507903/1‑150 GTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATC < 1:3102218/150‑1 GTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATC > 1:511942/1‑150 TTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCG > 1:207076/1‑150 CCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCT < 1:1055816/150‑1 CATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGC > 1:4052184/1‑136 TGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTacc < 1:2342639/150‑4 AGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAc < 1:2122180/150‑2 AGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAc < 1:3431214/150‑2 GTTCATCAATCCGGTTGGANGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGATGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAca > 1:3906880/1‑148 GTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAca > 1:2029922/1‑148 TTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAcac > 1:3988104/1‑147 TTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAAcac < 1:1422746/150‑4 TCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAACACG > 1:403873/1‑150 TCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAACACG < 1:3371049/150‑1 TCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCATTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACACTCGCCGCCGTGATCGCTACCGAAGA > 1:3464507/1‑145 CATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAACACGT > 1:429139/1‑150 ATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGCTACCGAAGAACACGTA < 1:3921302/150‑1 GCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATCGC > 1:1547251/1‑117 CCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCAGGTGCCGATCAGCCCGTATAGCAGTGCACCACGCTCGCCGCCGTGATC < 1:3446004/109‑1 ||||||||||| CGTCAACGGAGCACCGTATTGACGCTTATTTATTGGTGAGTACTACGTTCCATGGCAGGAGTTCATCAATCCGGTTGGAGGGCCATTCCGGCAGTACGCTCAGAATATGGCGCAGATACGCTTCCGGATCGATACCGTTCAGACGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_183/330‑477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTA > Xen14_75/12904‑12958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |