New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_12	= 188	95 (1.060)	57 (1.230)	31/178	0.2	66.6%	intergenic (–/+140)	–/Xen14_01540	–/hypothetical protein
	?	Xen14_29	60 =	0 (0.000)					intergenic (–/+63)	–/trpA	–/Tryptophan synthase alpha chain

GGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_12/42‑188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggttgagggttacctggtgatgaagtctcttgatcaggagatctgatcaagagacagTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGTAGCCGCTTTCATC  >  Xen14_29/60‑147                                                                                                                                                                                                                                             GGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTCCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCag                                                                                      >  1:545602/1‑148 GGCGAAAATGGGGCGAGGGCAGGACAGAAAACGCACTGGTCGCCC‑GGTGGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGTTTGGGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCag                                                                                      <  1:4021582/150‑3  GCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCT                                                                                      >  1:2864693/1‑150  GCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagc                                                                                     <  1:3618369/150‑4   CGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTC                                                                                     >  1:2648428/1‑150     AAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAGGAGACAGTCagcatg                                                                                  <  1:1898025/150‑7       atTGGGGCGNTGACATGGCAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATGTGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGA                                                                                 <  1:3914807/148‑1        CTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTATTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAG                                                                                <  1:1746133/150‑1        CTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatgagg                                                                               <  1:2686809/150‑10         TGGGGCGATGGCATGACAGCAAAGGCACCGGTCGCCC‑GGTTGGGTAGTCTTGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatggggg                                                                              <  1:1722688/150‑11         TGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatgaggg                                                                              >  1:212133/1‑140         TGGGACGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTATTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatgaggg                                                                              <  1:2188881/150‑11           GGGCGATGGCATGACAGCAAACGCACCGTTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGG                                                                             <  1:1346882/150‑1            GGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGT                                                                            >  1:2251640/1‑150            GGCGATGGCATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatgagggtaa                                                                           <  1:1393136/150‑14              CGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTT                                                                          <  1:392425/150‑1               GATGGCATGACAACAAACGCACTGGTCTCCCCTGTTGGGGATTCATGTGGGATGGCTGGTTCAGACTTCGGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTT                                                                         <  1:64051/150‑1                ATGGCATGACAGCAAACGCACCGTTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGTTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTC                                                                        <  1:838427/150‑1                ATGGCATGACAGCAAACGCACCGGTCGCCCTGTTTGGGTAGTCATGTGGGGTGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTC                                                                        <  1:150653/150‑1                ATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTC                                                                        <  1:838426/150‑1                ATGGCATGACAGAAACCACACCGTTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACGTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTC                                                                        <  1:4202456/150‑1                    CATGACAACAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgt                                                                    <  1:1025224/150‑5                     ATGACAGCAAACGCACCGGTCGCCC‑GGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCagcatga                                                                                 <  1:1356223/135‑8                      TGACAGCAAACGCACCGGTCGCCCCGGTTGGTTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgttt                                                                  <  1:530737/150‑7                      TGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCAGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCA                                                                  >  1:3579686/1‑150                        ACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTTATGTGGGATGGCTGGTTAAGACGGCAGGACATGGTTGAGGTTCACCTGGGGATGAATTCTCTTGATCAGGAGAGCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACA                                                                <  1:443377/150‑1                        ACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACA                                                                <  1:443376/150‑1                        ACAGCAAACGCACCGGTCACCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACA                                                                <  1:2932583/150‑1                        ACAGAAAACGCACCGGTCGCCCCGGTTGGGGAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttca                                                                <  1:2258594/150‑9                         caaCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATCCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttcag                                                               <  1:1021948/147‑10                         CAGCAAACGCACCGTTCGCCCCGGTGGGGTAGTCATGGGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttcag                                                               <  1:1021946/150‑10                         CAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGGGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttcag                                                               <  1:571175/150‑10                          AGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttcagc                                                              >  1:2745007/1‑140                               ACGCACCGGTCGCCCCGGTTGGGCAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACC                                                         >  1:2704764/1‑150                                CGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCccgtttc                                                                 >  1:1264920/1‑134                                     CGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGA                                                   <  1:2829417/150‑1                                          cCCCCGGTTGGGGAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTTTGGATCAGGGGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTT                                              <  1:289838/149‑1                                          GCCCCGTTTGGGTAGTCATGTGGGATGGTTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGGGATGAAGTTTTTTGATCAGGAGATCGGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTT                                              <  1:289835/150‑1                                          GCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTT                                              >  1:3114557/1‑150                                                GTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCTCCAGATGTTTTCTGGC                                        >  1:3290968/1‑150                                                 TTGGGTAGTCATGTGGGACGGCGGGTTCAGACTTCAGGATATGGTGGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGAGCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCCGGCG                                       <  1:4162119/150‑1                                                  TGGGTAGTCATGTTGGATGGCTGGTTCAGATTTCAGGAGGTGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGG                                      <  1:3129536/150‑1                                                  TGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGG                                      >  1:2251668/1‑150                                                  TGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATG                                                 <  1:3345834/139‑1                                                   GGGTAGTCATGTGGGATGGCTGGTTCAGGCTTTTGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTTTTGATCAGGAGCTCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGT                                     <  1:3845121/150‑1                                                                   TGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAATTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACG                     <  1:586217/150‑1                                                                   TGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACG                     <  1:586212/150‑1                                                                   TGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACG                     <  1:586216/150‑1                                                                   TGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGGGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACG                     <  1:586222/150‑1                                                                   TGGCTGGTCCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTTTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACG                     <  1:586213/150‑1                                                                     GCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTC                   >  1:3813934/1‑150                                                                      CTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATagcttcgg                  >  1:1468448/1‑142                                                                         GTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTCATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGT               >  1:3552511/1‑150                                                                          TTCAGACTTCAGGATATGGTTGGGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCGGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGTA              <  1:3868623/150‑1                                                                                   CAGGATATGGTTGAAGGTTCCCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAAAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAAATGTTTTCTGGCGGTTTGTCTCCAATTAACGTCGTGTAGCCGCTTTC     >  1:1865733/1‑150                                                                                     GGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGTAGCCGCTTTCct   >  1:4207068/1‑148                                                                                      GATATGGTTGAGGGTTACCTGGCAATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGTCCTCGGGAGGGGTTTCCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGTAGCCGCTTTCATC  <  1:3732098/150‑1                                                                                                                                                                                                                                             GGCGAAACTGGGGCGATGGCATGACAGCAAACGCACCGGTCGCCCCGGTTGGGTAGTCATGTGGGATGGCTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_12/42‑188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggttgagggttacctggtgatgaagtctcttgatcaggagatctgatcaagagacagTCCTCGGGAGGGGTTTTCTGTGCACAATAAACCGCCAGATGTTTTCTGGCGGTTTGTCTCAAATTAACGTCGTGTAGCCGCTTTCATC  >  Xen14_29/60‑147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.