| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_1 | 1 = | 0 (0.000) | 37 (0.560) +CAAAATGAATCAATCTTTACTTTCT |
26/246 | 0.9 | 100% | intergenic (–/‑286) | –/Xen14_00001 | –/hypothetical protein |
| ? | Xen14_148 | 943 = | NA (NA) | intergenic (‑46/–) | Xen14_04761/– | hypothetical protein/– | |||||
TTTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_1/147‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGA > Xen14_148/943‑985 ||||||||||||||||||||||||| TTTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAA < 1:717707/150‑1TTTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAA < 1:717706/150‑1TTTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGATAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAA < 1:1558193/150‑1 TTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACATAGGATAAAATACGACTATCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAA < 1:396270/150‑1 accggcatCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAAT < 1:216622/142‑1 accggcatCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAAT < 1:216619/142‑1 accggcatCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAAT < 1:216618/142‑1 TGCGCCCCATTATCCGAGCTAGCAGCTGCGTCCCTTACAGAGGATAAAATACGACTGTCAGGAGAGGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAA < 1:2275401/150‑1 GCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAAT < 1:2909174/150‑1 GCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCA > 1:4175463/1‑150 CCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAA > 1:1467349/1‑150 CATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCT > 1:3715189/1‑150 TTATCCGCGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTT < 1:3233326/150‑1 TTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTT < 1:3233327/150‑1 TATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTA < 1:322513/150‑1 TCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATAGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACT > 1:2942611/1‑150 gcaggaTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTT < 1:1417490/144‑1 CCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTT < 1:2933377/150‑1 CCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTGACTT < 1:3697792/150‑1 CGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTT > 1:2329996/1‑150 CGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTT > 1:364399/1‑150 GAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTC < 1:1317028/150‑1 GAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGATTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTC < 1:3390374/150‑1 CTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTA < 1:480582/150‑1 CTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTA < 1:514503/150‑1 GCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACA < 1:249015/150‑1 CAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAA < 1:3420237/150‑1 AGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATAAATCAATCTTTACTTTCTTAACAAA < 1:1981346/150‑1 GCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAAC > 1:4056993/1‑150 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA < 1:2067090/150‑1 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA < 1:2911920/150‑1 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA < 1:902842/150‑1 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA > 1:410967/1‑150 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA < 1:2067087/150‑1 CTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACA < 1:2068051/150‑1 TGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTGACAAACAT < 1:2512860/150‑1 GCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATGGCATACCTTTCAACCTTCACAATGAATCAATCTTTACTCTCTTAACAAACATC > 1:2848520/1‑150 GCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATC < 1:2873133/150‑1 ATCCCTTACAGAGGATAAAGCACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCAC > 1:2046571/1‑150 TCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACC > 1:2752886/1‑150 AGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCGACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGAC < 1:2028989/150‑1 GGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACTTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACA > 1:43570/1‑150 GGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACTTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACA > 1:43566/1‑150 ATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAAC < 1:2192227/150‑1 TAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACA < 1:653575/150‑1 TAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACA < 1:653572/150‑1 AAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAA < 1:3800107/150‑1 AATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCGTACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAA > 1:2816905/1‑150 AATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAA > 1:3399006/1‑150 TACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAGCACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCGCCATGGCATGACAACAAAAAC < 1:369159/150‑1 TACGACTGTCAGGAGAAGTCAGATTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTCAACAAACATCACCATGGCATGACAACAAAAAC > 1:1832522/1‑150 ACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATCTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACC < 1:2238247/150‑1 CGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACCG < 1:2233966/150‑1 ACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACCGGA < 1:2806538/150‑1 CTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACCGGAG > 1:2769501/1‑150 CTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACCGGAG > 1:1372142/1‑150 GTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAAaaggagtc > 1:804954/1‑142 GTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACT < 1:3542462/106‑1 cccgcttGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGACAACAAAAACCGGAGtccgg < 1:1961068/143‑6 TTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGAC > 1:1532715/1‑117 TTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTTCAAAATGAATCAATCTTTACTTTCTTAACAAACATCACCATGGCATGAC > 1:1532714/1‑117 ||||||||||||||||||||||||| TTTACTTGCGCCCCATTATCCGAGCTAGCAGCTGCATCCCTTACAGAGGATAAAATACGACTGTCAGGAGAAGTCAGGTTTCTGGTTAAAGAATTCCATGAACACCCCAAATTTACAGAAGATGGTGATAGCATACATTTCAACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_1/147‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGA > Xen14_148/943‑985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |