New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_168	= 629	0 (0.000)	19 (0.040)	12/172	2.1	100%	intergenic (‑111/–)	Xen14_04774/–	IS200/IS605 family transposase IS200C/–
	?	Xen14_2	63 =	0 (0.000)					intergenic (–/+66)	–/ydgJ	–/putative oxidoreductase YdgJ

CCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_168/527‑629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGCACAA  >  Xen14_2/63‑143                                                                                                                                                                                          CCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAATGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGC                                    <  1:119298/150‑1         TTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCA                            >  1:1816862/1‑150         TTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCA                            >  1:1816865/1‑150         TTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCA                            >  1:1816866/1‑150         TTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCA                            >  1:1816868/1‑150          TTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGC                                    >  1:3975957/1‑141           TCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGTCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACC                          >  1:528840/1‑150           TCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGTCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACC                          >  1:528837/1‑150               GTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCGCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCC                      >  1:3869634/1‑150                      ACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAGAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTC               >  1:2476928/1‑150                           CAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCA          <  1:2063097/150‑1                            AGTTGCCAGACCGCAAGGTGTATTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCATCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAA         >  1:550592/1‑150                            AGTTGCCAGACCGCAAGGTGTATTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCATCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAA         >  1:550589/1‑150                             GTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAG        >  1:2389620/1‑150                             GTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAG        >  1:2389617/1‑150                               TGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACCAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGC      >  1:3612666/1‑150                               TGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGC      <  1:3640900/150‑1                               TGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTCTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGC      >  1:3822084/1‑150                                   AGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCCCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAACATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGCACAA  >  1:351541/1‑150                                                                                                                                                                                          CCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_168/527‑629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAAAATGGATGGTGCTAATTGCACCATCCCCTTTTCACGCAAGGCACAA  >  Xen14_2/63‑143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.