New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_180 = 5260 (0.000)61 (0.950) 40/234 0.2 100% intergenic (–/–) –/– –/–
?Xen14_197 = 402 0 (0.000)intergenic (–/–) –/– –/–

GTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G  >  Xen14_197/259‑433
                                                                                                                                               |                                                                                                                                                
gTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGtt                                                                                                                                            <  1:1744699/150‑1 (MQ=255)
gTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGtt                                                                                                                                            <  1:2279159/150‑1 (MQ=255)
  tGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCg                                                                                                                                          >  1:3375516/1‑150 (MQ=255)
     ggCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGc                                                                                                                                       <  1:147196/150‑1 (MQ=40)
     ggCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGc                                                                                                                                       <  1:147197/150‑1 (MQ=40)
     ggCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGc                                                                                                                                       >  1:216358/1‑150 (MQ=40)
      gCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCa                                                                                                                                      <  1:1700657/150‑1 (MQ=40)
      gCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCa                                                                                                                                      <  1:1700656/150‑1 (MQ=40)
        ttGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAGACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCAtt                                                                                                                                    >  1:2237130/1‑150 (MQ=255)
         tGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATta                                                                                                                                   >  1:2294328/1‑150 (MQ=39)
         tGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATta                                                                                                                                   >  1:2294326/1‑150 (MQ=39)
          gAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATtat                                                                                                                                  >  1:2678559/1‑150 (MQ=39)
             ccGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAACCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATtatacc                                                                                                                               >  1:3482731/1‑148 (MQ=255)
             ccGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACACCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAAc                                                                                                                               >  1:3674957/1‑150 (MQ=255)
                    gCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGc                                                                                                                        >  1:1687393/1‑150 (MQ=37)
                        ggcggTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATcc                                                                                                                    <  1:582356/150‑1 (MQ=35)
                              gCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGGACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatag                                                                                                              <  1:965304‑M2/150‑37 (MQ=255)
                              gCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatag                                                                                                              <  1:1660404‑M2/150‑37 (MQ=255)
                               cGGAGTCCGGAGAGTAACTGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagt                                                                                                             >  1:2817614‑M2/1‑113 (MQ=255)
                               cGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagt                                                                                                             >  1:2498263‑M2/1‑113 (MQ=255)
                               cGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagt                                                                                                             >  1:853341‑M2/1‑113 (MQ=255)
                                 gAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgc                                                                                                           >  1:3131093‑M2/1‑111 (MQ=255)
                                      cGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgg                                                                                                      <  1:2739108‑M2/150‑45 (MQ=255)
                                      cGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACAAAACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgg                                                                                                      <  1:2739107‑M2/150‑45 (MQ=255)
                                      cGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACCACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgg                                                                                                      <  1:2739111‑M2/150‑45 (MQ=255)
                                       ggAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactggg                                                                                                     >  1:3451537‑M2/1‑105 (MQ=255)
                                        gagaGTAGCGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggt                                                                                                    >  1:2366521‑M2/1‑104 (MQ=255)
                                        gagaGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACTGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggt                                                                                                    >  1:2104811‑M2/1‑104 (MQ=255)
                                        gagaGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggt                                                                                                    >  1:1609183‑M2/1‑104 (MQ=255)
                                        gagaGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccacatagtgcactgggt                                                                                                    <  1:786511‑M2/150‑47 (MQ=255)
                                          gagTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggtta                                                                                                  <  1:139806‑M2/150‑49 (MQ=255)
                                            gTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatc                                                                                                <  1:3138594‑M2/150‑51 (MQ=255)
                                                cGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctc                                                                                            >  1:773131‑M2/1‑96 (MQ=255)
                                                cGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctc                                                                                            >  1:2049360‑M2/1‑96 (MQ=255)
                                                        cAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacggg                                                                                    >  1:2750330‑M2/1‑88 (MQ=255)
                                                            gagCTTCGTGAAAATGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaata                                                                                <  1:2965303‑M2/150‑67 (MQ=255)
                                                               cTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatct                                                                             >  1:3481138‑M2/1‑81 (MQ=255)
                                                                 tCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctac                                                                           <  1:3319328‑M2/150‑72 (MQ=255)
                                                                      aaaaCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcag                                                                      >  1:1261059‑M2/1‑74 (MQ=255)
                                                                       aaaCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagc                                                                     <  1:3392147‑M2/150‑78 (MQ=255)
                                                                        aaCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagca                                                                    >  1:104475‑M2/1‑72 (MQ=255)
                                                                         aCGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaa                                                                   >  1:1489386‑M2/1‑71 (MQ=255)
                                                                            aTAAAGCGTGACTATATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagcc                                                                >  1:268171‑M2/1‑68 (MQ=255)
                                                                            aTAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagcc                                                                >  1:116450‑M2/1‑68 (MQ=255)
                                                                            aTAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagcc                                                                >  1:268173‑M2/1‑68 (MQ=255)
                                                                            aTAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttagcgctcgccacgggaatatctacggcagcaagat                                                                >  1:999339‑M2/1‑68 (MQ=255)
                                                                              aaaGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccag                                                              >  1:618293‑M2/1‑66 (MQ=255)
                                                                              aaaGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccag                                                              >  1:618292‑M2/1‑66 (MQ=255)
                                                                               aaGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagt                                                             >  1:987454‑M2/1‑65 (MQ=255)
                                                                               aaGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagt                                                             >  1:987452‑M2/1‑65 (MQ=255)
                                                                                          cATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaag                                                  <  1:683159‑M2/150‑97 (MQ=255)
                                                                                           aTCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaacccagtaatgggttaagt                                                 >  1:2580550‑M2/1‑53 (MQ=255)
                                                                                            tCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggtta                                                                                                  <  1:871897‑M2/100‑49 (MQ=255)
                                                                                                 gtCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataccgaatggcgtccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataac                                           <  1:3540527‑M2/150‑104 (MQ=255)
                                                                                                   cATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacag                                         <  1:2021896‑M2/150‑106 (MQ=255)
                                                                                                    aTGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgaactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacagg                                        >  1:2688468‑M2/1‑44 (MQ=255)
                                                                                                      gCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtg                                      >  1:459793‑M2/1‑42 (MQ=255)
                                                                                                      gCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggtcaagtgataacaggtg                                      >  1:187386‑M2/1‑42 (MQ=255)
                                                                                                           aaCCAGACGGGTTAACGGCGGCAAAGAACCTTGCAGAtgcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctgg                                 >  1:205226‑M2/1‑37 (MQ=255)
                                                                                                           aaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctgg                                 >  1:2795523‑M2/1‑37 (MQ=255)
                                                                                                           aaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctgg                                 >  1:205231‑M2/1‑37 (MQ=255)
                                                                                                           aaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctgg                                 >  1:205230‑M2/1‑37 (MQ=255)
                                                                                                           aaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctgg                                 >  1:205229‑M2/1‑37 (MQ=255)
                                                                                                              cAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                              <  1:403114‑M2/150‑117 (MQ=255)
                                                                                                                     gTTAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaa                              >  1:3808480‑M2/1‑27 (MQ=255)
                                                                                                                       tAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagctagccagtaatgggttaagtgataacaggtgtctggaaatataggggc                     >  1:1971058‑M2/1‑25 (MQ=255)
                                                                                                                       tAACGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatatagg                        >  1:2034980‑M2/1‑25 (MQ=255)
                                                                                                                          cGGCAGCAAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggactatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaa                  <  1:1629236‑M2/150‑129 (MQ=255)
                                                                                                                               gcaAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccag             <  1:634689‑M2/150‑134 (MQ=255)
                                                                                                                                caAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccggtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccaga            <  1:2445935‑M2/150‑135 (MQ=255)
                                                                                                                                caAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccaga            <  1:1685831‑M2/150‑135 (MQ=255)
                                                                                                                                caAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccaga            <  1:1685830‑M2/150‑135 (MQ=255)
                                                                                                                                caAAGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccaga            <  1:28372‑M2/150‑135 (MQ=255)
                                                                                                                                 aaaGAACCTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaa           >  1:2979588‑M2/1‑15 (MQ=255)
                                                                                                                                       ccTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggc     >  1:1312746‑M2/1‑9 (MQ=255)
                                                                                                                                        cTTGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggca    <  1:3056638‑M2/150‑143 (MQ=255)
                                                                                                                                          tGCAGAggcgttcgagcattataacgaatggcatccgcatagtgcactgggttatcgctcgccacgggaatatctacggcagcaagccagtaatgggttaagtgataacaggtgtctggaaatataggggcaaatccagaagttggcacc  <  1:3565926‑M2/150‑145 (MQ=255)
                                                                                                                                               |                                                                                                                                                
GTTGGGGCTTGAACCGAAGAGCACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTGTCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G  >  Xen14_197/259‑433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.