| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | = 629 | 0 (0.000) | 33 (0.060) | 22/210 | 0.8 | 100% | intergenic (‑111/–) | Xen14_04774/– | IS200/IS605 family transposase IS200C/– |
| ? | Xen14_62 | 44 = | 0 (0.000) | intergenic (–/+117) | –/Xen14_04136 | –/hypothetical protein | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCCG > Xen14_62/1‑189 | ccattgggacccccttttgctttcttgtttgacacttgccgttgccagaccgcaaggtgttttaacaaatccaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCATAG‑CTGGGGGTTTTCTGTGCACaag > 1:3680862‑M2/116‑150 (MQ=255)ccattgggacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACaag > 1:1928697‑M2/116‑150 (MQ=255) ttgggacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACaagaag < 1:839958‑M2/38‑1 (MQ=255) ttgggacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACaagaag < 1:839956‑M2/38‑1 (MQ=255) ttgggacccccttttgatgtcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACaagaag < 1:839955‑M2/38‑1 (MQ=255) gacccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCt < 1:1142834‑M2/42‑1 (MQ=255) acccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaagggtttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGc < 1:3625283‑M2/41‑1 (MQ=255) acccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCATAG‑CTGGGGGTTTTCTGTGCACaagaag > 1:3738826‑M2/108‑145 (MQ=255) ccccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGt < 1:3713326‑M2/45‑1 (MQ=255) cccttttgatttcttgtttgacacttgcatttgtcagaccgcaaggtgttttaacaaatcaaaggggggtttaagaactggctcaaagctgaaagctttccggaACCCCCAGCCGAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTa < 1:846295‑M2/46‑1 (MQ=255) cccttttgatttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTa > 1:3364468‑M2/105‑150 (MQ=255) tttcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCTTACGAAAGTAc > 1:3139202‑M2/96‑150 (MQ=255) tcttgtttgacacttgcagttgccagaccgcaaggtgttttaacaaattaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGa < 1:193779‑M2/57‑1 (MQ=255) gtttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCtt > 1:965140‑M2/90‑150 (MQ=255) ttgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCtttt > 1:2336746‑M2/88‑150 (MQ=255) tgacatttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaggctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCttttt > 1:635499‑M2/87‑150 (MQ=255) tgacatttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaggctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCttttt > 1:635504‑M2/87‑150 (MQ=255) tgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAA‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCttttt > 1:2477151‑M2/87‑150 (MQ=255) tgacacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAA‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCttttt > 1:2477154‑M2/87‑150 (MQ=255) acacttgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCttttttt < 1:3016246‑M2/66‑1 (MQ=255) tgcagttgccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGtat < 1:226480‑M2/71‑1 (MQ=255) gttgccagaccgcaaggtgttttaacaaagcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCGGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTg < 1:2961622‑M2/75‑1 (MQ=255) gccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcgaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAt < 1:1521080‑M2/78‑1 (MQ=255) gccagaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTATCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAt > 1:272667‑M2/73‑150 (MQ=255) gaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGCACGAGCTTTTTTTCGTATATTGCATacac < 1:3748084‑M2/82‑1 (MQ=255) gaccgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGCACGAGCTTTTTTTCGTATATTGCATacac < 1:3748085‑M2/82‑1 (MQ=255) accgcaaggtgttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAt < 1:1368322‑M2/78‑1 (MQ=255) gttttaacaaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaATCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATga > 1:3406188‑M2/58‑150 (MQ=255) caaatcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGccc > 1:21975‑M2/51‑150 (MQ=255) atcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGa > 1:618693‑M2/48‑150 (MQ=255) atcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGa > 1:1021512‑M2/48‑150 (MQ=255) atcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGa > 1:618689‑M2/48‑150 (MQ=255) atcaaaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGa > 1:540498‑M2/48‑150 (MQ=255) ggggTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGa < 1:2394403/150‑1 (MQ=255) ttttAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATAcc > 1:2371224/1‑150 (MQ=255) ttAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCATAG‑CTGGGGGTTTTCTGTACACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACGCCGGGGGGATGAGAAGCCCCGACCGTGGATACCTg > 1:2203912/1‑150 (MQ=37) ggCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCa > 1:2817099/1‑150 (MQ=255) ggCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCa > 1:2817094/1‑150 (MQ=255) cTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAAc > 1:2807507/1‑150 (MQ=255) cTTTCCGGAACCCCCAGCCTAG‑CCGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCttttt > 1:1642602/1‑150 (MQ=255) gaaaaCCCCCAGC‑TAGGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATg < 1:2084532/124‑1 (MQ=38) cGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTcgccg < 1:2426133/150‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAG‑CTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGACCGGGGATACCTGGTTAATGCAACGGTTCACTCTTTTTCGCCG > Xen14_62/1‑189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |