| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | = 629 | 0 (0.000) | 33 (0.060) | 22/210 | 0.8 | 100% | intergenic (‑111/–) | Xen14_04774/– | IS200/IS605 family transposase IS200C/– |
| ? | Xen14_62 | 44 = | 0 (0.000) | intergenic (–/+117) | –/Xen14_04136 | –/hypothetical protein | |||||
CCATTGGGACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_168/515‑629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > Xen14_62/44‑146 CCATTGGGACCCCCTTTTGCTTTCTTGTTTGACACTTGCCGTTGCCAGACCGCAAGGTGTTTTAACAAATCCAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCATAGCTGGGGGTTTTCTGTGCACAAG > 1:3680862/1‑150CCATTGGGACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAG > 1:1928697/1‑150 TTGGGACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAG < 1:839958/150‑1 TTGGGACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAG < 1:839956/150‑1 TTGGGACCCCCTTTTGATGTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAG < 1:839955/150‑1 GACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCT < 1:1142834/150‑1 ACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGTTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGC < 1:3625283/148‑1 ACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCATAGCTGGGGGTTTTCTGTGCACAAGAAG > 1:3738826/1‑145 CCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGT < 1:3713326/150‑1 CCCTTTTGATTTCTTGTTTGACACTTGCATTTGTCAGACCGCAAGGTGTTTTAACAAATCAAAGGGGGGTTTAAGAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCGAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTA < 1:846295/150‑1 CCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTA > 1:3364468/1‑150 TTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCTTACGAAAGTAC > 1:3139202/1‑150 TCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATTAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGA < 1:193779/150‑1 GTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTT > 1:965140/1‑150 TTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTT > 1:2336746/1‑150 TGACATTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAGGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTT > 1:635499/1‑150 TGACATTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAGGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTT > 1:635504/1‑150 TGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAACTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTT > 1:2477154/1‑150 TGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAACTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTT > 1:2477151/1‑150 ACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTT < 1:3016246/150‑1 TGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTAT < 1:226480/150‑1 GTTGCCAGACCGCAAGGTGTTTTAACAAAGCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCGGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTG < 1:2961622/150‑1 GCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCGAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAT < 1:1521080/150‑1 GCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTATCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAT > 1:272667/1‑150 GACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGCACGAGCTTTTTTTCGTATATTGCATACAC < 1:3748084/150‑1 GACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGCACGAGCTTTTTTTCGTATATTGCATACAC < 1:3748085/150‑1 ACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCAT < 1:1368322/145‑1 GTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAATCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGA > 1:3406188/1‑150 CAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCC > 1:21975/1‑150 ATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > 1:1021512/1‑150 ATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > 1:618693/1‑150 ATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > 1:618689/1‑150 ATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGAACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > 1:540498/1‑150 CCATTGGGACCCCCTTTTGATTTCTTGTTTGACACTTGCAGTTGCCAGACCGCAAGGTGTTTTAACAAATCAAAAGGGGTTTTAATAACTGGCTCAAAGCTGAAAGCTTTCCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_168/515‑629‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaggggttttaataactggctcaaagctgaaagctttccggaACCCCCAGCCTAGCTGGGGGTTTTCTGTGCACAAGAAGAGCTCGTACGAAAGTACGAGCTTTTTTTCGTATATTGCATACACCGGGGGGATGAGAAGCCCCGA > Xen14_62/44‑146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |