| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_141 | 1 = | 0 (0.000) | 43 (0.050) +GCTCTCCT |
30/280 | 2.0 | 100% | intergenic (–/‑23) | –/Xen14_04755 | –/hypothetical protein |
| ? | Xen14_69 | = 14625 | 0 (0.000) | intergenic (+610/–) | Xen14_04280/– | hypothetical protein/– | |||||
CTGCCACAGACCTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_69/14477‑14625 | cTGCCACAGACCTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCa < 1:3535424‑M2/150‑2 (MQ=255) gCCACAGACCTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCagg < 1:3708765‑M2/150‑4 (MQ=255) ccTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagctta < 1:3107766‑M2/150‑12 (MQ=255) ccTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagctta < 1:3107765‑M2/150‑12 (MQ=255) ggTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtca < 1:3396928‑M2/150‑18 (MQ=255) ggcggcATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagac < 1:1520356‑M2/150‑28 (MQ=255) cggcATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacag > 1:1796748‑M2/1‑121 (MQ=255) cggcATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacag > 1:1796749‑M2/1‑121 (MQ=255) gcATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagattatggtcacttttgagacagct < 1:2054524‑M2/150‑32 (MQ=255) aTGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttat < 1:2580918‑M2/150‑34 (MQ=255) tGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatg > 1:1078714‑M2/1‑116 (MQ=255) cGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCGGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaa > 1:3604335‑M2/1‑113 (MQ=255) gTATCAGGCCTGCTGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCGATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagggcttatggtcacttttgagacaggtatggaaa > 1:3076934‑M2/1‑112 (MQ=255) gTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaa > 1:668287‑M2/1‑112 (MQ=255) tATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaat > 1:891197‑M2/1‑111 (MQ=255) tATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaat < 1:2222145‑M2/150‑40 (MQ=255) tATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaat > 1:1381509‑M2/1‑111 (MQ=255) aTCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGAGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaatt < 1:3661572‑M2/150‑41 (MQ=255) ggCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaa < 1:82090‑M2/150‑45 (MQ=255) ggCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaa < 1:82088‑M2/150‑45 (MQ=255) ggCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaa < 1:3188278‑M2/150‑45 (MQ=255) gCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATTCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaat > 1:3484707‑M2/1‑105 (MQ=255) gCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaat > 1:125562‑M2/1‑105 (MQ=255) cTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcc > 1:464871‑M2/1‑103 (MQ=255) gCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctg > 1:1227557‑M2/1‑101 (MQ=255) tGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcaca < 1:465593‑M2/150‑54 (MQ=255) ggggATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaa > 1:1816103‑M2/1‑96 (MQ=255) gggATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaag < 1:23574‑M2/150‑56 (MQ=255) gATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagca > 1:12871‑M2/1‑93 (MQ=255) ttttGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagg < 1:1248333‑M2/150‑60 (MQ=255) tggtgCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatg < 1:3166279‑M2/150‑65 (MQ=255) tggtgCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatg > 1:803031‑M2/1‑86 (MQ=255) gtgCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgag < 1:2488289‑M2/150‑67 (MQ=255) gtgCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgag < 1:2510768‑M2/150‑67 (MQ=255) gCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagta < 1:1660499‑M2/150‑69 (MQ=255) cGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtag < 1:2179463‑M2/150‑70 (MQ=255) acatttgtcaCGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtag > 1:2091295‑M2/5‑81 (MQ=255) acatttgtcaCGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtag < 1:3220710‑M2/146‑70 (MQ=255) acatttgtcaCGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagaaagttatggaaattaaaatcctgcacaagcagggaatgagtag < 1:3220711‑M2/146‑70 (MQ=255) cTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcgcttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccg < 1:2914563‑M2/150‑73 (MQ=255) cTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccg < 1:2914562‑M2/150‑73 (MQ=255) cTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccg < 1:646678‑M2/150‑73 (MQ=255) cTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccg < 1:646683‑M2/150‑73 (MQ=255) ttGTCACGAACGGTGCAATAGTGATCCGCACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGAATCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccgg > 1:1427018‑M2/1‑77 (MQ=255) ttGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCaggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagccgg < 1:71530‑M2/150‑74 (MQ=255) | CTGCCACAGACCTGCCGGTGGAGCTGGGCGGCATGACGTATCAGGCCTGCCGTGGGGATTTTGTGGTGCGTCTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_69/14477‑14625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |