| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_141 | 1 = | 0 (0.000) | 43 (0.050) +GCTCTCCT |
30/280 | 2.0 | 100% | intergenic (–/‑23) | –/Xen14_04755 | –/hypothetical protein |
| ? | Xen14_69 | = 14625 | 0 (0.000) | intergenic (+610/–) | Xen14_04280/– | hypothetical protein/– | |||||
CCGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_141/65‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGGTCTGTGGCAG < Xen14_69/14625‑14477 |||||||| CCGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGATTCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGCGGATCACTATTGCACCGTTCGTGACAA > 1:1427018/1‑150CCGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAA < 1:71530/150‑1 CGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAG < 1:2914562/150‑1 CGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAG < 1:646678/150‑1 CGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAG < 1:646683/150‑1 CGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGCGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAG < 1:2914563/150‑1 CTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTTTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAatgt < 1:3220711/150‑5 CTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAatgt < 1:3220710/150‑5 CTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAatgt > 1:2091295/1‑146 CTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACG < 1:2179463/150‑1 TACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGC < 1:1660499/150‑1 CTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCAC < 1:2488289/150‑1 CTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCAC < 1:2510768/150‑1 CATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCA < 1:3166279/150‑1 CATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCA > 1:803031/1‑150 CCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAA < 1:1248333/150‑1 TGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATC > 1:12871/1‑150 CTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCC < 1:23574/150‑1 TTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCC > 1:1816103/1‑150 TGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCA < 1:465593/150‑1 CAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGC > 1:1227557/1‑150 GGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAG > 1:464871/1‑150 ATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGC > 1:125562/1‑150 ATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGAATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGC > 1:3484707/1‑150 TTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCC < 1:82090/150‑1 TTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCC < 1:3188278/150‑1 TTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCC < 1:82088/150‑1 AATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCTCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGAT < 1:3661572/150‑1 ATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATA > 1:891197/1‑150 ATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATA < 1:2222145/150‑1 ATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATA > 1:1381509/1‑150 TTTCCATACCTGTCTCAAAAGTGACCATAAGCCCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATCGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACAGCAGGCCTGATAC > 1:3076934/1‑150 TTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATAC > 1:668287/1‑150 TTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCCGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACG > 1:3604335/1‑150 CATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCA > 1:1078714/1‑150 ATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCAT < 1:2580918/150‑1 agCTGTCTCAAAAGTGACCATAATCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGC < 1:2054524/148‑1 CTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCG > 1:1796749/1‑150 CTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCG > 1:1796748/1‑150 GTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCC < 1:1520356/150‑1 TGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACC < 1:3396928/150‑1 TAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGG < 1:3107766/150‑1 TAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGG < 1:3107765/150‑1 CCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGGTCTGTGGC < 1:3708765/150‑1 TGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGGTCTGTGGCAG < 1:3535424/150‑1 |||||||| CCGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_141/65‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAAGACGCACCACAAAATCCCCACGGCAGGCCTGATACGTCATGCCGCCCAGCTCCACCGGCAGGTCTGTGGCAG < Xen14_69/14625‑14477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |