New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_126 1702 =144 (0.570)52 (0.300) 29/296 2.8 37.8% intergenic (+73/‑85) Xen14_04725/Xen14_04726 hypothetical protein/hypothetical protein
?Xen14_75 = 13021 27 (0.290)intergenic (+695/–) Xen14_04344/– hypothetical protein/–

TCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_75/12877‑13052
                                                                                                                                                |                                                                                                                                                     
tCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAg                                                                                                                                                  >  1:817702/1‑150 (MQ=255)
tCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAg                                                                                                                                                  >  1:817701/1‑150 (MQ=255)
 ccGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAgt                                                                                                                                                 <  1:2581216/150‑1 (MQ=255)
       cGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTc                                                                                                                                           <  1:9025/150‑1 (MQ=255)
         aTACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTcca                                                                                                                                         <  1:2654922/150‑1 (MQ=255)
          tACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTccac                                                                                                                                        <  1:2501770/150‑1 (MQ=255)
             cGTTCAGACGGAGGGCCAGGACAGCAGGGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTTACGCATTAGACAAAGTGGTGTCCACCaa                                                                                                                                     <  1:2261696/150‑1 (MQ=25)
              gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                                                                                                    >  1:1085568/1‑150 (MQ=255)
              gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                                                                                                    >  1:1894171/1‑150 (MQ=255)
              gTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCaaa                                                                                                                                    >  1:1085569/1‑150 (MQ=255)
                tCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATa                                                                                                                                  <  1:2868529/150‑1 (MQ=255)
                tCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATa                                                                                                                                  >  1:3088178/1‑150 (MQ=255)
                tCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATa                                                                                                                                  >  1:2347603/1‑150 (MQ=255)
                  aGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAag                                                                                                                                <  1:1752278/150‑1 (MQ=255)
                       gCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTg                                                                                                                           >  1:3266596/1‑150 (MQ=255)
                        cAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTgg                                                                                                                          >  1:2071770/1‑150 (MQ=255)
                         aGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAGCCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTggg                                                                                                                         <  1:3390537/150‑1 (MQ=255)
                             ccGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaacc                                                                                                                     <  1:1294221/150‑4 (MQ=255)
                                tACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaa                                                                                                                  <  1:1604443/150‑7 (MQ=255)
                                     cagTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtc                                                                                                             <  1:3356749/150‑12 (MQ=255)
                                      agTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtca                                                                                                            <  1:53167/150‑13 (MQ=255)
                                      agTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtca                                                                                                            <  1:53168/150‑13 (MQ=255)
                                      agTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtca                                                                                                            <  1:53170/150‑13 (MQ=255)
                                       gTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtcag                                                                                                           <  1:231405/150‑14 (MQ=255)
                                       gTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtcag                                                                                                           <  1:710152/150‑14 (MQ=255)
                                       gTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGaaccaaagtgtcag                                                                                                           <  1:231402/150‑14 (MQ=255)
                                                  tCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATa                                                                                                                                  >  1:465921/1‑116 (MQ=255)
                                                                                               aaccgtaagCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggac                                                   <  1:2463370‑M2/146‑101 (MQ=255)
                                                                                               aaccgtaagCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggac                                                   <  1:2463374‑M2/146‑101 (MQ=255)
                                                                                                accgtaaGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggact                                                  <  1:362260‑M2/147‑102 (MQ=255)
                                                                                                accgtaaGCGTACAGCATGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggact                                                  <  1:397885‑M2/147‑102 (MQ=255)
                                                                                                    tAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcg                                              <  1:3379105‑M2/150‑106 (MQ=255)
                                                                                                     aaGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcga                                             >  1:293882‑M2/1‑44 (MQ=255)
                                                                                                     aaGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcga                                             >  1:591947‑M2/1‑44 (MQ=255)
                                                                                                     aaGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcga                                             >  1:723243‑M2/1‑44 (MQ=255)
                                                                                                         gTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatttagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaag                                         >  1:3290556‑M2/1‑40 (MQ=255)
                                                                                                         gTACAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaag                                         <  1:3833568‑M2/150‑111 (MQ=255)
                                                                                                           aCAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaa                                       >  1:645874‑M2/1‑38 (MQ=255)
                                                                                                           aCAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaa                                       >  1:645870‑M2/1‑38 (MQ=255)
                                                                                                            cAGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatggagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtgtggaattacaggactggcgaaaagaac                                      >  1:688321‑M2/1‑37 (MQ=255)
                                                                                                             aGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacc                                     >  1:2881587‑M2/1‑36 (MQ=255)
                                                                                                             aGCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacc                                     >  1:2706109‑M2/1‑36 (MQ=255)
                                                                                                              gCCTGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacct                                    <  1:525290‑M2/150‑116 (MQ=255)
                                                                                                                 tGAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgt                                 <  1:3213179‑M2/150‑119 (MQ=255)
                                                                                                                  gAACCGTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgta                                >  1:2768735‑M2/1‑31 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttaggcgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaac                                      >  1:829910‑M2/1‑26 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacggacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaag                           <  1:704125‑M2/150‑125 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacggacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaag                           <  1:704120‑M2/150‑125 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaagaag                           >  1:2135762‑M2/1‑26 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaag                           <  1:3271611‑M2/150‑125 (MQ=255)
                                                                                                                       gTCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaag                           >  1:294510‑M2/1‑26 (MQ=255)
                                                                                                                        tCTGGTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagt                          <  1:2976016‑M2/150‑126 (MQ=255)
                                                                                                                           ggTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtatt                       <  1:1934128‑M2/150‑129 (MQ=255)
                                                                                                                           ggTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtatt                       <  1:2947737‑M2/150‑129 (MQ=255)
                                                                                                                            gTCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattc                      <  1:2283375‑M2/150‑130 (MQ=255)
                                                                                                                             tCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacggacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcg                     >  1:361117‑M2/1‑20 (MQ=255)
                                                                                                                             tCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcg                     >  1:416950‑M2/1‑20 (MQ=255)
                                                                                                                             tCAGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcg                     <  1:2461026‑M2/150‑131 (MQ=255)
                                                                                                                               aGAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaa                   <  1:1648365‑M2/150‑133 (MQ=255)
                                                                                                                                gAATCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaat                  >  1:474587‑M2/1‑17 (MQ=255)
                                                                                                                                 aaTCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtatccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaat                  <  1:1088728‑M2/149‑134 (MQ=255)
                                                                                                                                  aTCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatga                <  1:876512‑M2/150‑136 (MQ=255)
                                                                                                                                   tCTGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaa               <  1:746796‑M2/150‑137 (MQ=255)
                                                                                                                                     tGACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacatcgtaaaaag                           <  1:3439603‑M2/136‑125 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagancctcgtaaaaagtattcgaatgaattc            >  1:3558746‑M2/1‑11 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            >  1:3387049‑M2/1‑11 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            <  1:539224‑M2/150‑140 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            <  1:539222‑M2/150‑140 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            <  1:3570505‑M2/150‑140 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            <  1:1840073‑M2/150‑140 (MQ=255)
                                                                                                                                      gACGAATTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattc            <  1:2191858‑M2/150‑140 (MQ=255)
                                                                                                                                         gaattAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaa         >  1:49446‑M2/3‑8 (MQ=255)
                                                                                                                                          aatTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaac        <  1:2297836‑M2/149‑144 (MQ=255)
                                                                                                                                          aatTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcaacaagaacctcgtaaaaagtattcgaatgaattcaaac        <  1:2391062‑M2/149‑144 (MQ=255)
                                                                                                                                           aTTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtagaaagtattcgaatgaattcaaact       <  1:3755860‑M2/150‑145 (MQ=255)
                                                                                                                                           aTTAGAgtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaact       <  1:1058167‑M2/150‑145 (MQ=255)
                                                                                                                                              agagtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaacttcg    >  1:3679031‑M2/1‑3 (MQ=255)
                                                                                                                                              agagtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaacttcg    >  1:3363640‑M2/1‑3 (MQ=255)
                                                                                                                                                agtaagcgtaaaccgaccgccgtatgtagccattagacaagaattggtaacttagacgcccatctgacacagacggacatctaagtatggaattacaggactggcgaaaagaacctcgtaaaaagtattcgaatgaattcaaacttcgta  <  1:3185863‑M2/150‑150 (MQ=255)
                                                                                                                                                |                                                                                                                                                     
TCCGGATCGATACCGTTCAGACGGCAGGCCCGTACAGCAGTGCACCACGCTCGCCGCCGTGATCGCTGCCGAAGAATACGTAGATGATATGACCTTTATGTAAGCGTACAGCCTGAACCGTCTGGTCAGAATCTGACGCATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_75/12877‑13052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.