BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_126	1702 =	144 (0.570)	52 (0.300)	29/296	2.8	37.8%	intergenic (+73/‑85)	Xen14_04725/Xen14_04726	hypothetical protein/hypothetical protein
*	?	Xen14_75	= 13021	27 (0.290)	52 (0.300)	29/296	2.8	37.8%	intergenic (+695/–)	Xen14_04344/–	hypothetical protein/–

Only 100 of 199 total aligned reads displayed.

TGAAAAGTTATATGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTAT  >  Xen14_126/1554‑1851

   aaaGTTATATGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGgtaaa                                                                                                                                                   >  1:3112141/1‑150 (MQ=255)

    aaGTTATATGATAATTTACTGGAAGAATTCGGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGgtaaac                                                                                                                                                  <  1:708645/150‑1 (MQ=255)

    aaGTTATATGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGgtaaac                                                                                                                                                  >  1:2967535/1‑150 (MQ=255)

      gTTATATGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGgtaaacgt                                                                                                                                                >  1:2377469/1‑150 (MQ=255)

          tatGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGgtaaacgtaaac                                                                                                                                            <  1:1388021/150‑1 (MQ=255)

            tGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAaccg                                                                                                                                          <  1:1206734/150‑1 (MQ=255)

                 aTTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGAccgc                                                                                                                                     >  1:1540333/1‑150 (MQ=255)

                 aTTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGAccgc                                                                                                                                     >  1:1835670/1‑150 (MQ=255)

                        ggAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGt                                                                                                                              >  1:3799001/1‑150 (MQ=255)

                        ggAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGt                                                                                                                              >  1:2210363/1‑150 (MQ=255)

                        ggAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGt                                                                                                                              >  1:1605015/1‑150 (MQ=255)

                        ggAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGt                                                                                                                              >  1:1692326/1‑150 (MQ=255)

                              aTTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCAt                                                                                                                        >  1:880640/1‑150 (MQ=255)

                              aTTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCAt                                                                                                                        >  1:2885735/1‑150 (MQ=255)

                               ttCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTATCCAtt                                                                                                                       <  1:1932389/150‑1 (MQ=255)

                                 cAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAg                                                                                                                     <  1:3351774/150‑1 (MQ=255)

                                   gACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGAc                                                                                                                   <  1:423231/150‑1 (MQ=255)

                                     ccGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCATTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACaa                                                                                                                 >  1:2547243/1‑150 (MQ=255)

                                      cGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAg                                                                                                                >  1:2811672/1‑150 (MQ=255)

                                        tGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGaa                                                                                                              >  1:832067/1‑150 (MQ=255)

                                        tGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGaa                                                                                                              >  1:844315/1‑150 (MQ=255)

                                            tCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTgg                                                                                                          <  1:420620/150‑1 (MQ=255)

                                            tCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTgg                                                                                                          <  1:629693/150‑1 (MQ=255)

                                            tCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTgg                                                                                                          <  1:629702/150‑1 (MQ=255)

                                              gATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTa                                                                                                        >  1:51860/1‑150 (MQ=255)

                                                tGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAAc                                                                                                      >  1:1178067/1‑150 (MQ=255)

                                                  aaaCAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACtt                                                                                                    >  1:1835265/1‑150 (MQ=255)

                                                   aaCAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCTGTATGTAGCAATTAGACAAGAATTGGTAACTTa                                                                                                   >  1:1545922/1‑150 (MQ=255)

                                                     cAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGa                                                                                                 >  1:749652/1‑150 (MQ=255)

                                                     cAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGa                                                                                                 >  1:430128/1‑150 (MQ=255)

                                                     cAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGa                                                                                                 >  1:2343690/1‑150 (MQ=255)

                                                     cAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCAATTAGACAAGAATTGGTAACTTAGa                                                                                                 >  1:2434122/1‑150 (MQ=255)

                                                      aaaaaGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGAc                                                                                                <  1:3391600/150‑1 (MQ=255)

                                                                 gCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGac                                                                                     <  1:1770203/150‑1 (MQ=255)

                                                                        ttAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACg                                                                              <  1:2021794/150‑1 (MQ=255)

                                                                          aatatacgtAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGa                                                                            <  1:831754/142‑1 (MQ=255)

                                                                               acaTAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCt                                                                       >  1:3599208/1‑150 (MQ=255)

                                                                                caTAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTa                                                                      <  1:3163365/150‑1 (MQ=255)

                                                                                  tAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAg                                                                    <  1:1282731/150‑1 (MQ=255)

                                                                                   agtcagagCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGt                                                                   >  1:3083482/5‑150 (MQ=255)

                                                                                     ttAGAGCATGGTTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTAt                                                                 <  1:3456117/150‑1 (MQ=255)

                                                                                     ttAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTAt                                                                 >  1:140335/1‑150 (MQ=255)

                                                                                      tAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATg                                                                >  1:765119/1‑150 (MQ=255)

                                                                                      tAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATg                                                                >  1:930974/1‑150 (MQ=255)

                                                                                               ggTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAg                                                       >  1:3803147/1‑150 (MQ=255)

                                                                                                 tGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGa                                                     >  1:828180/1‑150 (MQ=255)

                                                                                                  aaccgtaagcgtacagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGAc                                                    <  1:2463370‑M1/100‑1 (MQ=255)

                                                                                                       taagcgtacagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCg                                               <  1:3379105‑M1/105‑1 (MQ=255)

                                                                                                       aGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCg                                               <  1:1844529/150‑1 (MQ=255)

                                                                                                        aagcgtacagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGa                                              >  1:293882‑M1/45‑150 (MQ=255)

                                                                                                           ctACAGCAGCTTAATACTGTAGAGCCTTTCTTCATGAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGaaaa                                           <  1:682254/150‑1 (MQ=255)

                                                                                                            tACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAg                                          <  1:944115/150‑1 (MQ=255)

                                                                                                            tACAGCAGCTTAATACTGTAGAGCCTCTCTTCATTAAAAGGTAAACGTAAACCGACCNCCGTATGTAGCCANTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAg                                          <  1:3571859/150‑1 (MQ=255)

                                                                                                            gtacagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATTTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAg                                          >  1:3290556‑M1/41‑150 (MQ=255)

                                                                                                            gtacagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAg                                          <  1:3833568‑M1/110‑1 (MQ=255)

                                                                                                              acagcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGaa                                        >  1:645874‑M1/39‑150 (MQ=255)

                                                                                                               agcagcTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATCAGACGAGAATTGGTAACTTAGACGCCCATCTGATATAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAAc                                       <  1:2120122/150‑1 (MQ=17)

                                                                                                                agcctgaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAAcc                                      >  1:2706109‑M1/37‑150 (MQ=255)

                                                                                                                  agcTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTc                                    <  1:3277674/150‑1 (MQ=255)

                                                                                                                   gcTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCg                                   >  1:2470491/1‑150 (MQ=255)

                                                                                                                     gaaccgtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTa                                 >  1:2768735‑M1/32‑150 (MQ=255)

                                                                                                                          gtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACGGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAg                            <  1:704120‑M1/124‑1 (MQ=255)

                                                                                                                          gtctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCtcgtaagaag                            >  1:2135762‑M1/27‑146 (MQ=255)

                                                                                                                          aCTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAg                            <  1:3207966/150‑1 (MQ=255)

                                                                                                                           tctggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGt                           <  1:2976016‑M1/125‑1 (MQ=255)

                                                                                                                             gTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCAACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTac                         <  1:1869406/150‑2 (MQ=255)

                                                                                                                             gTAGAGCCGTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTAt                         >  1:573028/1‑150 (MQ=255)

                                                                                                                             gTAGAGCCGTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTAt                         >  1:573033/1‑150 (MQ=255)

                                                                                                                              tAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGCCCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTAtt                        >  1:406352/1‑150 (MQ=255)

                                                                                                                              ggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTAtt                        <  1:1934128‑M1/128‑1 (MQ=255)

                                                                                                                              ggtcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTAtt                        <  1:2947737‑M1/128‑1 (MQ=255)

                                                                                                                                tcagaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACGGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCg                      >  1:361117‑M1/21‑150 (MQ=255)

                                                                                                                                gagCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCg                      >  1:2011655/1‑150 (MQ=255)

                                                                                                                                  gCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaa                    <  1:576482/150‑1 (MQ=255)

                                                                                                                                  gCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaa                    >  1:2354691/1‑150 (MQ=255)

                                                                                                                                  agaatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaa                    <  1:1648365‑M1/132‑1 (MQ=255)

                                                                                                                                    cTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaatg                  <  1:2894231/150‑1 (MQ=255)

                                                                                                                                    cTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACAGCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaatg                  <  1:1642363/150‑1 (MQ=255)

                                                                                                                                    aatctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTATCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaat                   <  1:1088728‑M1/133‑1 (MQ=255)

                                                                                                                                      tctgacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaatgaa                <  1:746796‑M1/136‑1 (MQ=255)

                                                                                                                                       tcttcATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCgaatgaat               <  1:1122413/150‑1 (MQ=255)

                                                                                                                                         gacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGANCCTCGTAAAAAGTATTCGAATGAATTc             >  1:3558746‑M1/12‑150 (MQ=255)

                                                                                                                                         gacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTc             <  1:1840073‑M1/139‑1 (MQ=255)

                                                                                                                                         gacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTc             >  1:3387049‑M1/12‑150 (MQ=255)

                                                                                                                                         gacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTc             <  1:539222‑M1/139‑1 (MQ=255)

                                                                                                                                         gacgaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTc             <  1:2191858‑M1/139‑1 (MQ=255)

                                                                                                                                          tcATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCa            >  1:2757498/1‑150 (MQ=255)

                                                                                                                                          tcATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCa            >  1:2404991/1‑150 (MQ=255)

                                                                                                                                            gaattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCaaa          >  1:49446‑M1/9‑150 (MQ=255)

                                                                                                                                             ttAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAAc         <  1:2593112/150‑1 (MQ=255)

                                                                                                                                             ttAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAAc         >  1:3438158/1‑150 (MQ=255)

                                                                                                                                             aattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAAc         <  1:2297836‑M1/143‑1 (MQ=255)

                                                                                                                                             aattagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCAACAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAAc         <  1:2391062‑M1/143‑1 (MQ=255)

                                                                                                                                              tAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACt        <  1:2061017/150‑1 (MQ=255)

                                                                                                                                              attagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAGAAAGTATTCGAATGAATTCAAACt        <  1:3755860‑M1/144‑1 (MQ=255)

                                                                                                                                              attagaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACt        <  1:1058167‑M1/144‑1 (MQ=255)

                                                                                                                                                 agaGTAAGCGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCg     >  1:3679031‑M1/4‑150 (MQ=255)

                                                                                                                                                   ggTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACATACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTa   <  1:2854417/150‑1 (MQ=255)

                                                                                                                                                    gtaagcgtaaacCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTAt  >  1:1807227/1‑150 (MQ=255)

                                                                                                                                                    gtaaacgtaaacCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTAt  >  1:3263505/1‑150 (MQ=255)

TGAAAAGTTATATGATAATTTACTGGAAGAATTCAGACCGTGGATCGATGAAACAAAAAGGTTAGGCATCCTTTAATACACATAGTTAGAGCATGGGTGAATGAGCTCTACAGCAGCTTAATACTGTAGAGCCTTTCTTCATTAAAAGGTAAACGTAAACCGACCGCCGTATGTAGCCATTAGACAAGAATTGGTAACTTAGACGCCCATCTGACACAGACGGACATCTAAGTATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTAT  >  Xen14_126/1554‑1851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.