New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_136 1 =0 (0.000)72 (0.860) 35/218 0.5 100% intergenic (–/+298) –/intA_4 –/Prophage integrase IntA
?Xen14_170 = 580 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATACTCCG  >  Xen14_136/1‑149
                                                                                                            |                                                                                                                                                    
ggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgca                                                                                                             >  1:3349160‑M1/109‑150 (MQ=255)
ggaaagattaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgca                                                                                                             >  1:3432637‑M1/109‑150 (MQ=255)
  aaagatgaaaataatacggcatcaagtttcgtccaaagaagccagcgtcacctcatcttaacggaaaggtggaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTgcagg                                                                                                           >  1:2567929‑M1/107‑150 (MQ=255)
       ttaaaataatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGaa                                                                                                      >  1:2063610‑M1/102‑150 (MQ=255)
             taatacggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGgcag                                                                                                <  1:1963011‑M1/55‑1 (MQ=255)
                   tgcatcaagtttcgtccaaataagccagcgtcaccgcatatcaacggaaaggttgaacgttcccaaaagacagacacagcagagtcttaCGCTACCGTAGATCCTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTAc                                                                                          >  1:3809221‑M1/90‑150 (MQ=255)
                   ggcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacacagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTAc                                                                                          >  1:3809220‑M1/90‑150 (MQ=255)
                    gcatcaagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACt                                                                                         <  1:102569‑M1/62‑1 (MQ=255)
                        caagtttcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATaa                                                                                     >  1:9174‑M1/85‑150 (MQ=255)
                              tcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGa                                                                               <  1:271669‑M1/72‑1 (MQ=255)
                              tcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGa                                                                               <  1:271666‑M1/72‑1 (MQ=255)
                              tcgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGa                                                                               <  1:271664‑M1/72‑1 (MQ=255)
                               cgtccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGaa                                                                              >  1:1147478‑M1/78‑150 (MQ=255)
                                 tccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACg                                                                            >  1:1314866‑M1/76‑150 (MQ=255)
                                 tccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTACTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACg                                                                            <  1:1329542‑M1/75‑1 (MQ=255)
                                 tccaaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTACTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACg                                                                            <  1:1329544‑M1/75‑1 (MQ=255)
                                   caaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTc                                                                          <  1:269926‑M1/77‑1 (MQ=255)
                                   caaataagccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTc                                                                          >  1:3000307‑M1/74‑150 (MQ=255)
                                          gccagcgtcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGggaacgtctgaaccg                                                                   <  1:3168018‑M1/84‑8 (MQ=255)
                                                 tcacctcatcttaacggaaaggttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTataactgggaacgtctgaaccgccccggg                                                            >  1:3813189‑M1/60‑136 (MQ=255)
                                                       cagtgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGt                                                      <  1:3400784‑M1/97‑1 (MQ=255)
                                                        agtgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTa                                                     >  1:2944045‑M1/53‑150 (MQ=255)
                                                        agtgtgccacttcaattgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTa                                                     >  1:3215267‑M1/53‑150 (MQ=255)
                                                        agtgtgccacttcaattgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTa                                                     >  1:3735884‑M1/53‑150 (MQ=255)
                                                         gtgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaa                                                    >  1:1493476‑M1/52‑150 (MQ=255)
                                                          tgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaaa                                                   >  1:1285046‑M1/51‑150 (MQ=255)
                                                          tgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaaa                                                   >  1:1285045‑M1/51‑150 (MQ=255)
                                                          tgtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaaa                                                   >  1:1285042‑M1/51‑150 (MQ=255)
                                                           gtgtcacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTaaaa                                                  >  1:3518927‑M1/50‑150 (MQ=255)
                                                           gtgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTCTAACTGGGAACGTCCTCATAGCGCTCACAACGGCaaaa                                                  <  1:3819325‑M1/101‑1 (MQ=255)
                                                            tgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                 >  1:170971‑M1/49‑150 (MQ=255)
                                                            tgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                 >  1:170975‑M1/49‑150 (MQ=255)
                                                            tgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                 <  1:2918148‑M1/102‑1 (MQ=255)
                                                            tgccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAc                                                 >  1:3741026‑M1/49‑150 (MQ=255)
                                                              ccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTc                                               <  1:3081422‑M1/104‑1 (MQ=255)
                                                              ccacttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTc                                               <  1:1996112‑M1/104‑1 (MQ=255)
                                                                 cttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGa                                            <  1:3145443‑M1/107‑1 (MQ=255)
                                                                  ttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGAt                                           >  1:1476849‑M1/43‑150 (MQ=255)
                                                                  ttcagttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGAt                                           >  1:1476851‑M1/43‑150 (MQ=255)
                                                                      gttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAg                                       <  1:2422778‑M1/112‑1 (MQ=255)
                                                                       ttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgc                                      >  1:1654984‑M1/38‑150 (MQ=255)
                                                                       ttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgc                                      >  1:1654991‑M1/38‑150 (MQ=255)
                                                                       ttgaacgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAgc                                      >  1:1654989‑M1/38‑150 (MQ=255)
                                                                           acgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTa                                  >  1:1908254‑M1/34‑150 (MQ=255)
                                                                            cgttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAGCTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTAc                                 <  1:2181963‑M1/118‑1 (MQ=255)
                                                                              ttcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACtt                               >  1:1481937‑M1/31‑150 (MQ=255)
                                                                               tcccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCCGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGAGAACGTCCTCATAGCGCTCCCAACGGTAAAACTCCGACGGAGCGCTACttt                              <  1:3584579‑M1/121‑1 (MQ=255)
                                                                                cccaaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTg                             >  1:1052287‑M1/29‑150 (MQ=255)
                                                                                   aaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                          >  1:144114‑M1/26‑150 (MQ=255)
                                                                                   aaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                          >  1:508786‑M1/26‑150 (MQ=255)
                                                                                   aaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                          >  1:508784‑M1/26‑150 (MQ=255)
                                                                                   aaaagacagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                          >  1:3173871‑M1/26‑150 (MQ=255)
                                                                                        acagacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAAAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCt                     >  1:2628418‑M1/21‑150 (MQ=255)
                                                                                          agacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTNCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAAc                          <  1:3647309‑M1/125‑1 (MQ=255)
                                                                                          agacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTga                   <  1:1967684‑M1/132‑1 (MQ=255)
                                                                                          agacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTga                   >  1:1199429‑M1/19‑150 (MQ=255)
                                                                                          agacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTga                   >  1:1199431‑M1/19‑150 (MQ=255)
                                                                                          agacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTga                   >  1:1199430‑M1/19‑150 (MQ=255)
                                                                                           gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                  >  1:3369530‑M1/18‑150 (MQ=255)
                                                                                           gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                  <  1:1300644‑M1/133‑1 (MQ=255)
                                                                                           gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                  <  1:1300643‑M1/133‑1 (MQ=255)
                                                                                           gacaaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAACATTACTAGAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTgag                  <  1:1300645‑M1/133‑1 (MQ=255)
                                                                                             caaagcagattcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                >  1:2607221‑M1/16‑150 (MQ=255)
                                                                                             caaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                <  1:1299591‑M1/135‑1 (MQ=255)
                                                                                             caaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaa                <  1:1299590‑M1/135‑1 (MQ=255)
                                                                                              aaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaa               >  1:269671‑M1/15‑150 (MQ=255)
                                                                                              aaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaa               >  1:1070797‑M1/15‑150 (MQ=255)
                                                                                              aaagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaa               >  1:269667‑M1/15‑150 (MQ=255)
                                                                                               aagcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGaaaa              >  1:307396‑M1/14‑150 (MQ=255)
                                                                                                agcagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAac             <  1:2276398‑M1/138‑1 (MQ=255)
                                                                                                  cagagtcttaCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAacac           <  1:3180221‑M1/140‑1 (MQ=255)
                                                                                                          taCGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAAC‑CCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATATTCCg  <  1:178078‑M1/148‑1 (MQ=255)
                                                                                                            |                                                                                                                                                    
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTACCGTAGATCTTTCTGCTGATGACCTGAAGGAACTGCAGGCAGAATGGCAGCATTACTATAACTGGGAACGTCCTCATAGCGCTCACAACGGTAAAACTCCGATGGAGCGCTACTTTGAACTTGCTGAGAAAACACCATACTCCG  >  Xen14_136/1‑149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.