| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_121 | 1 = | 0 (0.000) | 51 (0.120) | 28/236 | 1.4 | 100% | intergenic (–/+117) | –/Xen14_04715 | –/hypothetical protein |
| ? | Xen14_184 | = 443 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTCC > Xen14_121/1‑150 | tgagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg > 1:1583444‑M1/75‑150 (MQ=255)tgagaaaggtgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAg > 1:3480439‑M1/75‑150 (MQ=255) gagaaagttgaaagagttttgccgtagaaatgatgcctgcatgatcagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGc < 1:3066960‑M1/77‑1 (MQ=255) gagaaagttgaaagagttttgccgtagaaatgatgcctgcatgatcagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGc < 1:1737638‑M1/77‑1 (MQ=255) gagaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGc < 1:3041174‑M1/77‑1 (MQ=255) agaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAGCATTTGGGGTGCAGTTCAGCt < 1:3490711‑M1/78‑1 (MQ=255) agaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCt < 1:469902‑M1/78‑1 (MQ=255) gaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCagcaa > 1:3521833‑M1/72‑148 (MQ=255) agttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCg < 1:3754906‑M1/82‑1 (MQ=255) agttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCg < 1:2307144‑M1/82‑1 (MQ=255) agttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTAGGGTGCAGTTCAGCAAGCg < 1:2307149‑M1/82‑1 (MQ=255) gttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGt < 1:487479‑M1/83‑1 (MQ=255) gttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTCCAGCTAGCGt < 1:487478‑M1/83‑1 (MQ=255) tgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCg > 1:1282713‑M1/66‑150 (MQ=255) gaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGTGGTGCAGTTCAGCTAGCGTCGc < 1:432144‑M1/86‑1 (MQ=255) gaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGc > 1:1648481‑M1/65‑150 (MQ=255) gaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTAGGGTGCAGTTCAGCAAGCGTCGc > 1:3001673‑M1/65‑150 (MQ=255) aagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGTTAGCGTCGCAt < 1:2258667‑M1/88‑1 (MQ=255) aagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCAt < 1:2258661‑M1/88‑1 (MQ=255) aagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCAt < 1:2258662‑M1/88‑1 (MQ=255) aagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCAt < 1:2258666‑M1/88‑1 (MQ=255) gttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTCGcatccgg < 1:3185057‑M1/92‑4 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc < 1:2560343‑M1/93‑1 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGc < 1:2326917‑M1/93‑1 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTCgcatccggc > 1:283869‑M1/58‑146 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTCgcatccggc > 1:283870‑M1/58‑146 (MQ=255) ttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCAAGCGTCgcatccggc > 1:283872‑M1/58‑146 (MQ=255) cgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtgtg > 1:1857515‑M1/52‑150 (MQ=255) cgtagaaatgatgccagcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtgtg < 1:3006881‑M1/99‑1 (MQ=255) aaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCa < 1:1181588‑M1/104‑1 (MQ=255) aaatgatgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCa < 1:1181587‑M1/104‑1 (MQ=255) tgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACg > 1:2302865‑M1/41‑150 (MQ=255) tgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACg > 1:2139924‑M1/41‑150 (MQ=255) tgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACg > 1:2139922‑M1/41‑150 (MQ=255) tgcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACg > 1:2139921‑M1/41‑150 (MQ=255) gcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACgg < 1:768939‑M1/111‑1 (MQ=255) gcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACgg > 1:833168‑M1/40‑150 (MQ=255) gcctgcatgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACgg < 1:1603453‑M1/111‑1 (MQ=255) catgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCg > 1:2447863‑M1/35‑150 (MQ=255) catgaccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCg < 1:2313910‑M1/116‑1 (MQ=255) ccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTaa < 1:2976773‑M1/121‑1 (MQ=255) ccagccaggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTaa < 1:2880450‑M1/121‑1 (MQ=255) caggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCg < 1:2892072‑M1/126‑1 (MQ=255) aggtaatgatttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCgg > 1:1601073‑M1/24‑150 (MQ=255) atttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATtgtg < 1:2442373‑M1/99‑1 (MQ=255) ttacagcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTc < 1:1578611‑M1/137‑1 (MQ=255) agcggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCcgcg > 1:3477308‑M1/10‑150 (MQ=255) ggcaagTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGcc < 1:2380127‑M1/144‑1 (MQ=255) agTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCtttt > 1:2552314‑M1/3‑150 (MQ=255) gTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTc < 1:1939572‑M1/149‑1 (MQ=255) gTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTc < 1:1176158‑M1/149‑1 (MQ=255) ttttACTTCAAATGAATGTTTCATAAACTGTACCTTCATATGTCAGATTATGTCCAACATTTGAGGTGCAGTTCATCTAGCGTAGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTATCCATGTCCGCGGCCTTTTcc > 1:3195383/1‑150 (MQ=25) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGCTAGCGTCGCATCAGGCATTGTGCTCCATTGACGGATGCGTTTAATGGCGGTGTCCATGTCCGCGGCCTTTTCC > Xen14_121/1‑150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |