| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_121 | 1 = | 0 (0.000) | 51 (0.120) | 28/236 | 1.4 | 100% | intergenic (–/+117) | –/Xen14_04715 | –/hypothetical protein |
| ? | Xen14_184 | = 443 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GAAAAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_121/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaaCTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA < Xen14_184/443‑370 GAAAAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC < 1:1176158/150‑1GAAAAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC < 1:1939572/150‑1 AAAAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACT > 1:2552314/1‑150 GGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCC < 1:2380127/150‑1 CGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCT > 1:3477308/1‑150 GACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAA < 1:1578611/150‑1 CCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCT > 1:1601073/1‑150 CGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTG < 1:2892072/150‑1 TTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGG < 1:2880450/150‑1 TTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGG < 1:2976773/150‑1 CGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATG > 1:2447863/1‑150 CGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATG < 1:2313910/150‑1 CCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGC < 1:1603453/150‑1 CCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGC < 1:768939/150‑1 CCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGC > 1:833168/1‑150 CGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA > 1:2139921/1‑150 CGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA > 1:2139922/1‑150 CGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA > 1:2139924/1‑150 CGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA > 1:2302865/1‑150 TGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTT < 1:1181587/150‑1 TGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTT < 1:1181588/150‑1 CACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCTGGCATCATTTCTACG < 1:3006881/150‑1 CACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACG > 1:1857515/1‑150 CACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAAT < 1:2442373/114‑1 gccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA > 1:283869/5‑150 gccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA > 1:283870/5‑150 gccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA > 1:283872/5‑150 GCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA < 1:2326917/150‑1 GCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA < 1:2560343/150‑1 ccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAAC < 1:3185057/147‑1 ATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTT < 1:2258666/150‑1 ATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTT < 1:2258662/150‑1 ATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTT < 1:2258661/150‑1 ATGCGACGCTAACTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTT < 1:2258667/150‑1 GCGACGCTTGCTGAACTGCACCCTAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTC > 1:3001673/1‑150 GCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTC > 1:1648481/1‑150 GCGACGCTAGCTGAACTGCACCACAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTC < 1:432144/150‑1 CGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCA > 1:1282713/1‑150 ACGCTAGCTGGACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAAC < 1:487478/150‑1 ACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAAC < 1:487479/150‑1 CGCTTGCTGAACTGCACCCTAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACT < 1:2307149/150‑1 CGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACT < 1:2307144/150‑1 CGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACT < 1:3754906/150‑1 ttGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTC > 1:3521833/3‑150 AGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:469902/150‑1 AGCTGAACTGCACCCCAAATGCTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:3490711/150‑1 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < 1:3041174/150‑1 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGATCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < 1:3066960/150‑1 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGATCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < 1:1737638/150‑1 CTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCACCTTTCTCA > 1:3480439/1‑150 CTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA > 1:1583444/1‑150 GAAAAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_121/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaaCTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA < Xen14_184/443‑370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |