New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_118	1 =	0 (0.000)	19 (0.050)	15/234	1.8	100%	intergenic (–/+257)	–/cbpM	–/Chaperone modulatory protein CbpM
	?	Xen14_184	= 442	0 (0.000)					intergenic (–/–)	–/–	–/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGCCTGATAAGATGCGTTAAGCGTCGCA  >  Xen14_118/1‑143                                                                       |                                                                                                                                               gaaagttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCCTAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAAc                                                                 <  1:276841‑M1/80‑1 (MQ=255)     gttgaaagagttttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCt                                                             <  1:2200159‑M1/84‑1 (MQ=255)               gtttgccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATTCGGCCt                                                   >  1:3150315‑M1/57‑150 (MQ=255)                    ccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACggg                                              >  1:1793607‑M1/52‑150 (MQ=255)                    ccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACggg                                              >  1:3731021‑M1/52‑150 (MQ=255)                    ccgtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATCTGGGGTGCAGTTCAGAACGCCTTATCCGGCATACggg                                              <  1:1527745‑M1/99‑1 (MQ=255)                      gtagaaatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGaa                                                                  <  1:2307512‑M1/79‑1 (MQ=255)                           aatgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTCTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTg                                       <  1:2373425‑M1/106‑1 (MQ=255)                             tgatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCt                                     <  1:933862‑M1/108‑1 (MQ=255)                              gatgcctgcatgaccagccaggtaatgatttacagcggcgaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCtt                                    >  1:2508515‑M1/42‑150 (MQ=255)                              gatgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCtt                                    >  1:2508516‑M1/42‑150 (MQ=255)                                tgcctgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCtttt                                  <  1:750831‑M1/111‑1 (MQ=255)                                    tgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTtgtg                              <  1:2916792‑M1/115‑1 (MQ=255)                                    tgcatgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTtgtg                              <  1:2916795‑M1/115‑1 (MQ=255)                                       atgaccagccaggtaatgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGc                           >  1:562519‑M1/33‑150 (MQ=255)                                                       tgatttacagcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGCCTGATAAGATGCGTTa           <  1:2464448‑M1/134‑1 (MQ=255)                                                               agcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGCCTGATAAGATGCGTTAAGCGTCGc   <  1:2857019‑M1/142‑1 (MQ=255)                                                                gcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCGGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGCCTGATAAGATGCGTTAAGCGTCGCa  <  1:3517490‑M1/143‑1 (MQ=255)                                                                gcggcaaGTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCGGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTCTTTGTGGGCCTGATACGATGCGTTAagcgttgca  <  1:3681733‑M1/143‑5 (MQ=255)                                                                       |                                                                                                                                               ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTTTTACTTCAAATGAATGTTTCATAAACTGTACCTTCAGATGTCAGATTATGTCCAACATTTGGGGTGCAGTTCAGAACGCCTTATCCGGCCTACGGGAACAGTGCTTTTTGTGGGCCTGATAAGATGCGTTAAGCGTCGCA  >  Xen14_118/1‑143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.