| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_118 | 1 = | 0 (0.000) | 19 (0.050) | 15/234 | 1.8 | 100% | intergenic (–/+257) | –/cbpM | –/Chaperone modulatory protein CbpM |
| ? | Xen14_184 | = 442 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_118/143‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaacTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTC < Xen14_184/442‑373 tgcaACGCTTAACGCATCGTATCAGGCCCACAAAGAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCCGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGC < 1:3681733/146‑1TGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCCGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGC < 1:3517490/150‑1 GCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCT < 1:2857019/150‑1 TAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCA < 1:2464448/150‑1 GCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCAT > 1:562519/1‑150 CACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCA < 1:2916795/150‑1 CACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCA < 1:2916792/150‑1 AAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA < 1:750831/150‑1 AAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATC > 1:2508516/1‑150 AAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTCGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATC > 1:2508515/1‑150 AGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCA < 1:933862/150‑1 CACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAGACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATT < 1:2373425/150‑1 CCCGTATGCCGGATAAGGCGTTCTGAACTGCACCCCAGATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG < 1:1527745/150‑1 CCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG > 1:3731021/1‑150 CCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG > 1:1793607/1‑150 AGGCCGAATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAc > 1:3150315/1‑149 AGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAAC < 1:2200159/150‑1 GTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTAGGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTC < 1:276841/150‑1 TTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTAC < 1:2307512/128‑1 TGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_118/143‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaacTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTC < Xen14_184/442‑373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |