| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_139 | = 1349 | 0 (0.000) | 26 (0.290) | 11/274 | 2.0 | 100% | intergenic (‑120/–) | Xen14_04753/– | hypothetical protein/– |
| ? | Xen14_148 | 954 = | NA (NA) | intergenic (‑57/–) | Xen14_04761/– | hypothetical protein/– | |||||
TCGGTGAAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_139/1217‑1349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaaacatc‑ACCATGGCATGACAACAAAAACCGGAGCCGGACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_148/954‑989 TCGGTGAAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACA < 1:1661039/150‑1 GTGAAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAA > 1:578951/1‑150 GAAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATCCACC‑GGACATGACAACAAAAAC < 1:1932586/150‑1 AAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACC < 1:3269442/150‑1 AAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACC < 1:1582096/150‑1 GCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGA < 1:1422220/150‑1 GCATTCGTCGTCCTGTTTATCCATATTTTCTGCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGA < 1:3145038/150‑1 CATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAG > 1:2042926/1‑150 CATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAG > 1:2042927/1‑150 CATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAG > 1:1415903/1‑150 ATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGC > 1:1565916/1‑150 ATTCGTCATCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGC > 1:1367/1‑150 TTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCCAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCC < 1:1848440/150‑1 TCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATCCACC‑GGACATGACAACAAAAAACGGAGCCG > 1:2968620/1‑150 CGTCGTCCTGTTTATCCGTATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGG < 1:1846067/150‑1 GTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGA < 1:3385602/150‑1 GTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATCCACC‑GGACATGACAACAAAAACCGGAGCCGGACTCCggtt < 1:3202806/150‑5 TTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttt < 1:3782097/150‑6 TTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttt < 1:499360/150‑6 TTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttt < 1:499362/150‑6 TTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttt < 1:499365/150‑6 TTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttt < 1:499366/150‑6 TCCATATTTTCTTCACAACTAACTCTTTAATCTATGAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttttgtg < 1:399308/150‑10 CCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttttgtga < 1:3393916/150‑11 CCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttttgtga > 1:3754355/1‑140 TTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑ACCATGGCATGCCAACAAAAACCGGAGCCGGACTCCggttttgtgaagctg > 1:1384710/1‑135 TCGGTGAAAGCATTCGTCGTCCTGTTTATCCATATTTTCTTCACAACTAACTCTTTAATCTATTAATTATATTGGCATACTCAACCACAAAACCTCCAGCAGTTTTGCCATCTTTGCTTTCCTAACAAACATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_139/1217‑1349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaaacatc‑ACCATGGCATGACAACAAAAACCGGAGCCGGACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_148/954‑989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |