| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_004302 | 15,047 | 1 | . | A | 21.0% | 485.9 / 106.2 | 252 | intergenic (+140/‑7) | r1tp26/r1tp27 | HNH endonuclease/Structural protein |
| Reads supporting (aligned to +/- strand): ref base . (194/5); new base A (53/0); total (247/5) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 302 total aligned reads displayed.
GCCCCCTCCCTCTGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGAAA > NC_004302/14973‑15117 | gCCCCCTCCCTCTGGGTCAGCTCGTACTTCACGCCGTCACTGAA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑c > 1:6955280/1‑75 (MQ=255) accggttctctGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aa > 1:15292745/8‑75 (MQ=255) actccggtctGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaa > 1:2326854/8‑75 (MQ=255) gtctgctctGGGTCAGCTCGTACTTCACGCCGTCACTATA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaa > 1:7087552/6‑75 (MQ=255) gtaaagtctGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaa > 1:13760591/7‑75 (MQ=255) atggggactGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaa > 1:14609484/8‑75 (MQ=255) ggggttgtGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTATTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa > 1:5923867/8‑75 (MQ=255) attgtactGGGT‑AGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:5483363/7‑75 (MQ=255) gagtgaggggTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:9359141/8‑75 (MQ=255) gagtgaggggTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:5302033/8‑75 (MQ=255) gaaacttGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:8231448/7‑75 (MQ=255) cttattggggTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:14793790/8‑75 (MQ=255) acaataagggTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:15953331/8‑75 (MQ=255) aaactttGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑a > 1:12509012/7‑75 (MQ=255) tgaaaatggTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑At > 1:6154465/8‑75 (MQ=255) tactctGGGTCAGCTCGTACTTCACGCCGTCACAGTA‑‑CATATTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑ac > 1:1455966/3‑74 (MQ=255) cactggggTGAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑acc > 1:8651906/6‑73 (MQ=255) taagacgTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAG‑ATTg > 1:10223339/7‑75 (MQ=255) gcgagtgTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTg > 1:3883722/7‑75 (MQ=255) tctGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAA‑C‑‑aaaaggagat < 1:11880056/75‑7 (MQ=255) ggtGGGTCA‑CTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGAc > 1:9839150/3‑75 (MQ=255) gcgacgTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGa > 1:9773383/6‑75 (MQ=255) gatGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑aaaaa‑aattg > 1:11977821/3‑71 (MQ=255) aggaagTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGa > 1:8779258/6‑75 (MQ=255) tagctgaaGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGAc > 1:9120283/8‑75 (MQ=255) gtagttCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGAc > 1:15456346/6‑75 (MQ=255) tttatttgCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACt > 1:5189292/8‑75 (MQ=255) gggtgcAGCGCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACt > 1:3054249/6‑75 (MQ=255) ctaagtaGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGAc > 1:10334635/7‑75 (MQ=255) atgcgaaGCTCGTACCTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACt > 1:14667033/7‑75 (MQ=255) agagTCAGGTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACt > 1:10871334/4‑75 (MQ=255) gtcgattcTCGGACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑actgactg > 1:15666998/8‑75 (MQ=255) acaattgCTCATACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAN‑ATTGACTg > 1:457233/7‑75 (MQ=255) tatgagatCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTg > 1:9573099/8‑75 (MQ=255) taggaGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑a > 1:6622209/5‑75 (MQ=255) gagctggtCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑a > 1:334308/8‑75 (MQ=255) aacattcTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTg > 1:10112509/7‑75 (MQ=255) atCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑a > 1:2869537/2‑75 (MQ=255) tCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑aaa > 1:17096156/1‑75 (MQ=255) cAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAATATTGACTG‑aga > 1:3232624/1‑73 (MQ=255) cAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑aaaa > 1:1244063/1‑75 (MQ=255) agagtatttCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAg > 1:5595968/8‑75 (MQ=255) tcgagattCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGt > 1:6817590/7‑75 (MQ=255) tCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGt > 1:14059038/1‑75 (MQ=255) gTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAA‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTa > 1:12240668/1‑75 (MQ=255) acatttCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTAt > 1:5051857/5‑75 (MQ=255) taaaaaaCGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTAtt > 1:7506771/7‑75 (MQ=255) aaagaaaCGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CAAAAAAA‑ATTGACTG‑AAAAAGGTa > 1:16207379/7‑75 (MQ=255) tgttcgggCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTg > 1:5739366/8‑75 (MQ=255) tgttcgggCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTg > 1:6289048/8‑75 (MQ=255) gcTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTg > 1:15151006/2‑75 (MQ=255) catccaagCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTg > 1:16451825/8‑75 (MQ=255) tgtgtgcccGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTg > 1:15260560/8‑75 (MQ=255) ccaataaccGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTgg > 1:4234752/8‑75 (MQ=255) tatacctgTCATTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGAt > 1:4172764/8‑75 (MQ=255) aagaatgTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGAt > 1:7630921/7‑75 (MQ=255) actgtaccACTATA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATa > 1:1743420/8‑75 (MQ=255) aactggacACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATAc > 1:1078442/8‑75 (MQ=255) gcttaaaCTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCt > 1:13241248/7‑75 (MQ=255) ttggtagtGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCt > 1:1657601/8‑75 (MQ=255) cctgctttGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTg > 1:16765656/8‑75 (MQ=255) ccGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTg < 1:16947630/75‑1 (MQ=255) gTCACTGTATTCATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGaaccctg > 1:7325913/1‑69 (MQ=255) gTCACTGTA‑‑CATTTATTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTgag > 1:12956899/1‑75 (MQ=255) agggtagTA‑‑CACTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTgag > 1:10404907/7‑75 (MQ=255) ctaatagaTTTTTTCTCACGCTACTTTATAAAGTAG‑A‑‑AAAAA‑ATTGACTT‑AAAAAGGTATTTGATAACTGATAtt > 1:11548152/8‑75 (MQ=255) gTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTaa > 1:11586983/1‑75 (MQ=255) ttggatttttCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAg > 1:12685988/6‑75 (MQ=255) tatcaggaCGCGACTTTAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATc > 1:11376813/8‑75 (MQ=255) gttCTCGCGCGATTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTg > 1:3423069/2‑75 (MQ=255) gaggagaCGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTg > 1:16329249/7‑75 (MQ=255) gtaagtagACTTTAAAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGtt > 1:7212438/8‑75 (MQ=255) agaaCGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTc > 1:14356839/4‑75 (MQ=255) gaggcgATTTTAGAAAGGAG‑CAAAAAAA‑ATTGACTA‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTc > 1:17143018/4‑75 (MQ=255) cACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCttaagca < 1:13848556/75‑7 (MQ=255) gcacgggtttAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATa > 1:17225285/8‑75 (MQ=255) aagattttAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGCTCATaaa > 1:11536111/6‑75 (MQ=255) atgttttAGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATaaa > 1:17288816/5‑75 (MQ=255) cagttAGAAGGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGa > 1:4820318/4‑75 (MQ=255) ttagaaaaGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAag > 1:10546578/6‑75 (MQ=255) ggatttgaGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAag > 1:2580271/8‑75 (MQ=255) cttgaagaGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAag > 1:11839561/8‑75 (MQ=255) tggattaGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAaga > 1:9275311/7‑75 (MQ=255) gggcgagggAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAaga > 1:4907783/8‑75 (MQ=255) gcaGAAAGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAag > 1:4720431/3‑75 (MQ=255) gagaaaaGGAG‑CAAAAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGaa > 1:7833290/5‑75 (MQ=255) ttaaaaGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAaga > 1:11072298/4‑75 (MQ=255) taaaattgAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAagag > 1:4485281/8‑75 (MQ=255) ctacctggAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAaga > 1:3124611/7‑75 (MQ=255) caGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAagag > 1:13694441/2‑75 (MQ=255) gtataGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATAGGATACCTGAGATATAAGCTATCTGTTCATAAACGAAGAGc > 1:17561885/5‑75 (MQ=255) agttaGGAG‑CA‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAagag > 1:8732558/5‑75 (MQ=255) aataaGGAGAC‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAagag > 1:2669768/4‑75 (MQ=255) aGAAAGGAG‑G‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGc > 1:5002745/1‑75 (MQ=255) tttcagtc‑‑AAAAA‑ATTGACTGAAAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCa > 1:13268573/8‑75 (MQ=255) ttgAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGaa > 1:6524972/3‑75 (MQ=255) gcgAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGaa > 1:3938135/3‑75 (MQ=255) aaatg‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGaa > 1:6882161/5‑75 (MQ=255) tttg‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGaaa > 1:1123127/4‑75 (MQ=255) aagtc‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGaaa > 1:3730546/5‑75 (MQ=255) | GCCCCCTCCCTCTGGGTCAGCTCGTACTTCACGCCGTCACTGTA‑‑CATTTTTTCTCACGCGACTTTAGAAAGGAG‑C‑‑AAAAA‑ATTGACTG‑AAAAAGGTATTGGATACCTGAGATTTAAGCTATCTGTTCATAAACGAAGAGCAGAAA > NC_004302/14973‑15117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |